rs80359883
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;CGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGCCAGGAGCTGGACACCTACCTGAT) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(CGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGCCAGGAGCTGGACACCTACCTGAT;CGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGCCAGGAGCTGGACACCTACCTGAT) | 0 | common in clinvar |
Make rs80359883(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43045706 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80359883 |
dbSNP (classic) | rs80359883 |
ClinGen | rs80359883 |
ebi | rs80359883 |
HLI | rs80359883 |
Exac | rs80359883 |
Gnomad | rs80359883 |
Varsome | rs80359883 |
LitVar | rs80359883 |
Map | rs80359883 |
PheGenI | rs80359883 |
Biobank | rs80359883 |
1000 genomes | rs80359883 |
hgdp | rs80359883 |
ensembl | rs80359883 |
geneview | rs80359883 |
scholar | rs80359883 |
rs80359883 | |
pharmgkb | rs80359883 |
gwascentral | rs80359883 |
openSNP | rs80359883 |
23andMe | rs80359883 |
SNPshot | rs80359883 |
SNPdbe | rs80359883 |
MSV3d | rs80359883 |
GWAS Ctlg | rs80359883 |
Max Magnitude | 6 |
BRCA1, c.5503_5564del62 (p.Arg1835Thrfs)
ClinVar | |
---|---|
Risk | rs80359883(-;-) |
Alt | rs80359883(-;-) |
Reference | Rs80359883(CGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGCCAGGAGCTGGACACCTACCTGAT;CGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGCCAGGAGCTGGACACCTACCTGAT) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer |
Variation | info |
Gene | BRCA1 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 1 |
Reversed | 1 |
HGVS | NC_000017.10:g.41197723_41197784del62 |
CLNSRC | Breast Cancer Information Core (BRCA1) |
CLNACC | RCV000049021.2, RCV000112684.3, |