rs80359301
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;A) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(A;A) | 0 | common in clinvar |
Make rs80359301(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32333232 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80359301 |
dbSNP (classic) | rs80359301 |
ClinGen | rs80359301 |
ebi | rs80359301 |
HLI | rs80359301 |
Exac | rs80359301 |
Gnomad | rs80359301 |
Varsome | rs80359301 |
LitVar | rs80359301 |
Map | rs80359301 |
PheGenI | rs80359301 |
Biobank | rs80359301 |
1000 genomes | rs80359301 |
hgdp | rs80359301 |
ensembl | rs80359301 |
geneview | rs80359301 |
scholar | rs80359301 |
rs80359301 | |
pharmgkb | rs80359301 |
gwascentral | rs80359301 |
openSNP | rs80359301 |
23andMe | rs80359301 |
SNPshot | rs80359301 |
SNPdbe | rs80359301 |
MSV3d | rs80359301 |
GWAS Ctlg | rs80359301 |
Max Magnitude | 6 |
rs80359301, also known as c.1754delA, 1982delA, c.1754_1754delA and p.Lys585Argfs, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
rs80359301 can also represent c.1754dupA, which is also considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80359301(-;-) |
Alt | rs80359301(-;-) |
Reference | Rs80359301(A;A) |
Significance | Pathogenic |
Disease | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer not provided Familial cancer of breast |
Variation | info |
Gene | BRCA2 |
CLNDBN | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer, familial 2 not provided Familial cancer of breast |
Reversed | 0 |
HGVS | NC_000013.10:g.32907369delA |
CLNSRC | Breast Cancer Information Core (BRCA2) |
CLNACC | RCV000043873.5, RCV000077262.5, RCV000212214.1, RCV000463045.1, |