rs80359152
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(G;G) | 0 | common in clinvar |
Make rs80359152(A;A) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32379800 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80359152 |
dbSNP (classic) | rs80359152 |
ClinGen | rs80359152 |
ebi | rs80359152 |
HLI | rs80359152 |
Exac | rs80359152 |
Gnomad | rs80359152 |
Varsome | rs80359152 |
LitVar | rs80359152 |
Map | rs80359152 |
PheGenI | rs80359152 |
Biobank | rs80359152 |
1000 genomes | rs80359152 |
hgdp | rs80359152 |
ensembl | rs80359152 |
geneview | rs80359152 |
scholar | rs80359152 |
rs80359152 | |
pharmgkb | rs80359152 |
gwascentral | rs80359152 |
openSNP | rs80359152 |
23andMe | rs80359152 |
SNPshot | rs80359152 |
SNPdbe | rs80359152 |
MSV3d | rs80359152 |
GWAS Ctlg | rs80359152 |
Max Magnitude | 6 |
aka c.9004G>A (p.Glu3002Lys or E3002K)
Classified as a BRCA2 gene pathogenic mutation for breast cancer based on likelihood cited in ClinVar and in [PMID 29394989]
ClinVar | |
---|---|
Risk | rs80359152(A;A) |
Alt | rs80359152(A;A) |
Reference | Rs80359152(G;G) |
Significance | Other |
Disease | Breast-ovarian cancer not provided Hereditary cancer-predisposing syndrome Hereditary breast and ovarian cancer syndrome |
Variation | info |
Gene | BRCA2 |
CLNDBN | Breast-ovarian cancer, familial 2 not provided Hereditary cancer-predisposing syndrome Hereditary breast and ovarian cancer syndrome |
Reversed | 0 |
HGVS | NC_000013.10:g.32953937G>A |
CLNSRC | Ambry Genetics ClinVar |
CLNACC | RCV000031784.6, RCV000045685.6, RCV000130642.3, RCV000195385.3, |