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rs80358550

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(A;A) 0 common in clinvar
(A;T) 6 BRCA2 variant considered pathogenic for breast cancer
Make rs80358550(A;G)
Make rs80358550(G;G)
ReferenceGRCh38 38.1/141
Chromosome13
Position32337428
GeneBRCA2
is asnp
is mentioned by
dbSNPrs80358550
dbSNP (classic)rs80358550
ClinGenrs80358550
ebirs80358550
HLIrs80358550
Exacrs80358550
Gnomadrs80358550
Varsomers80358550
LitVarrs80358550
Maprs80358550
PheGenIrs80358550
Biobankrs80358550
1000 genomesrs80358550
hgdprs80358550
ensemblrs80358550
geneviewrs80358550
scholarrs80358550
googlers80358550
pharmgkbrs80358550
gwascentralrs80358550
openSNPrs80358550
23andMers80358550
SNPshotrs80358550
SNPdbers80358550
MSV3drs80358550
GWAS Ctlgrs80358550
Max Magnitude6

aka c.3073A>T (p.Lys1025Ter) but note also presence of c.3073A>G (p.Lys1025Glu)

In ClinVar, c.3073A>T is pathogenic for breast cancer by expert consensus; however, c.3073A>G is annotated as either benign or of uncertain significance.


ClinVar
Risk rs80358550(G;G) rs80358550(T;T)
Alt rs80358550(G;G) rs80358550(T;T)
Reference Rs80358550(A;A)
Significance Other
Disease not specified Breast-ovarian cancer Hereditary cancer-predisposing syndrome Hereditary breast and ovarian cancer syndrome
Variation info
Gene BRCA2
CLNDBN not specified Breast-ovarian cancer, familial 2 Hereditary cancer-predisposing syndrome Hereditary breast and ovarian cancer syndrome
Reversed 0
HGVS NC_000013.10:g.32911565A>G; NC_000013.10:g.32911565A>T
CLNSRC Ambry Genetics ClinVar
CLNACC RCV000044112.6, RCV000077290.4, RCV000131460.3, RCV000195367.3, RCV000031399.4,