rs80358464
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;T) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(G;T) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(T;T) | 0 | common in clinvar |
Make rs80358464(A;A) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32333278 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80358464 |
dbSNP (classic) | rs80358464 |
ClinGen | rs80358464 |
ebi | rs80358464 |
HLI | rs80358464 |
Exac | rs80358464 |
Gnomad | rs80358464 |
Varsome | rs80358464 |
LitVar | rs80358464 |
Map | rs80358464 |
PheGenI | rs80358464 |
Biobank | rs80358464 |
1000 genomes | rs80358464 |
hgdp | rs80358464 |
ensembl | rs80358464 |
geneview | rs80358464 |
scholar | rs80358464 |
rs80358464 | |
pharmgkb | rs80358464 |
gwascentral | rs80358464 |
openSNP | rs80358464 |
23andMe | rs80358464 |
SNPshot | rs80358464 |
SNPdbe | rs80358464 |
MSV3d | rs80358464 |
GWAS Ctlg | rs80358464 |
Max Magnitude | 6 |
rs80358464, also known as Y600X, c.1800T>G and p.Tyr600Ter, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80358464(A;A) rs80358464(C;C) rs80358464(G;G) |
Alt | rs80358464(A;A) rs80358464(C;C) rs80358464(G;G) |
Reference | Rs80358464(T;T) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary cancer-predisposing syndrome not provided Hereditary breast and ovarian cancer syndrome Familial cancer of breast |
Variation | info |
Gene | BRCA2 |
CLNDBN | Breast-ovarian cancer, familial 2 Hereditary cancer-predisposing syndrome not provided Hereditary breast and ovarian cancer syndrome Familial cancer of breast |
Reversed | 0 |
HGVS | NC_000013.10:g.32907415T>A; NC_000013.10:g.32907415T>C; NC_000013.10:g.32907415T>G |
CLNSRC | Ambry Genetics ClinVar |
CLNACC | RCV000031340.6, RCV000131060.3, RCV000216426.2, RCV000233828.1, RCV000043892.2, RCV000077266.6, RCV000162912.1, RCV000418517.1, |