rs80358173
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(C;G) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(G;G) | 0 | common in clinvar |
(G;T) | 6 | BRCA1 variant considered pathogenic for breast cancer |
Make rs80358173(A;A) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 17 |
Position | 43057136 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80358173 |
dbSNP (classic) | rs80358173 |
ClinGen | rs80358173 |
ebi | rs80358173 |
HLI | rs80358173 |
Exac | rs80358173 |
Gnomad | rs80358173 |
Varsome | rs80358173 |
LitVar | rs80358173 |
Map | rs80358173 |
PheGenI | rs80358173 |
Biobank | rs80358173 |
1000 genomes | rs80358173 |
hgdp | rs80358173 |
ensembl | rs80358173 |
geneview | rs80358173 |
scholar | rs80358173 |
rs80358173 | |
pharmgkb | rs80358173 |
gwascentral | rs80358173 |
openSNP | rs80358173 |
23andMe | rs80358173 |
SNPshot | rs80358173 |
SNPdbe | rs80358173 |
MSV3d | rs80358173 |
GWAS Ctlg | rs80358173 |
Max Magnitude | 6 |
ClinVar | |
---|---|
Risk | rs80358173(A;A) rs80358173(C;C) rs80358173(T;T) |
Alt | rs80358173(A;A) rs80358173(C;C) rs80358173(T;T) |
Reference | Rs80358173(G;G) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 |
Reversed | 1 |
HGVS | NC_000017.10:g.41209153C>A; NC_000017.10:g.41209153C>G; NC_000017.10:g.41209153C>T |
CLNSRC | Breast Cancer Information Core (BRCA1) |
CLNACC | RCV000258503.1, RCV000258407.1, RCV000112558.1, |