rs80358137
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 3 | BRCA1 variant of unclear significance |
(C;G) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(G;G) | 0 | common in clinvar |
Make rs80358137(A;A) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43063374 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80358137 |
dbSNP (classic) | rs80358137 |
ClinGen | rs80358137 |
ebi | rs80358137 |
HLI | rs80358137 |
Exac | rs80358137 |
Gnomad | rs80358137 |
Varsome | rs80358137 |
LitVar | rs80358137 |
Map | rs80358137 |
PheGenI | rs80358137 |
Biobank | rs80358137 |
1000 genomes | rs80358137 |
hgdp | rs80358137 |
ensembl | rs80358137 |
geneview | rs80358137 |
scholar | rs80358137 |
rs80358137 | |
pharmgkb | rs80358137 |
gwascentral | rs80358137 |
openSNP | rs80358137 |
23andMe | rs80358137 |
SNPshot | rs80358137 |
SNPdbe | rs80358137 |
MSV3d | rs80358137 |
GWAS Ctlg | rs80358137 |
Max Magnitude | 6 |
c.5153-1G>A
some ClinVar reports indicate pathogenicity, others don't
ClinVar | |
---|---|
Risk | rs80358137(A;A) rs80358137(C;C) rs80358137(T;T) |
Alt | rs80358137(A;A) rs80358137(C;C) rs80358137(T;T) |
Reference | Rs80358137(G;G) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome |
Variation | info |
Gene | BRCA1 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 1 Hereditary breast and ovarian cancer syndrome |
Reversed | 1 |
HGVS | NC_000017.10:g.41215391C>A; NC_000017.10:g.41215391C>G; NC_000017.10:g.41215391C>T |
CLNSRC | Breast Cancer Information Core (BRCA1) Database of BRCA1 and BRCA2 sequence variants that have been clinically reclassified by a quantitative integrated evaluation |
CLNACC | RCV000048828.2, RCV000031224.6, RCV000048827.3, RCV000048826.2, RCV000112530.1, |