rs80357972
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;TG) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(TG;TG) | 0 | common in clinvar |
Make rs80357972(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43115742 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357972 |
dbSNP (classic) | rs80357972 |
ClinGen | rs80357972 |
ebi | rs80357972 |
HLI | rs80357972 |
Exac | rs80357972 |
Gnomad | rs80357972 |
Varsome | rs80357972 |
LitVar | rs80357972 |
Map | rs80357972 |
PheGenI | rs80357972 |
Biobank | rs80357972 |
1000 genomes | rs80357972 |
hgdp | rs80357972 |
ensembl | rs80357972 |
geneview | rs80357972 |
scholar | rs80357972 |
rs80357972 | |
pharmgkb | rs80357972 |
gwascentral | rs80357972 |
openSNP | rs80357972 |
23andMe | rs80357972 |
SNPshot | rs80357972 |
SNPdbe | rs80357972 |
MSV3d | rs80357972 |
GWAS Ctlg | rs80357972 |
Max Magnitude | 6 |
rs80357972, also known as 236delTG, c.117_118delTG and p.Cys39_Asp40TerProfs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80357972(-;-) |
Alt | rs80357972(-;-) |
Reference | Rs80357972(TG;TG) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer Hereditary cancer-predisposing syndrome |
Variation | info |
Gene | BRCA1 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 1 Hereditary cancer-predisposing syndrome |
Reversed | 1 |
HGVS | NC_000017.10:g.41267759_41267760delCA |
CLNSRC | Breast Cancer Information Core (BRCA1) |
CLNACC | RCV000047373.2, RCV000077484.5, RCV000162845.1, |