rs768966657
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(;) | 0 | common in clinvar |
(-;-) | 0 | common/normal |
(-;GAC) | 6 | For those w/ cancer, a slightly worse prognosis; also, slightly increased melanoma risk |
Make rs768966657(GAC;GAC) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 9 |
Position | 21971021 |
Gene | CDKN2A |
is a | snp |
is | mentioned by |
dbSNP | rs768966657 |
dbSNP (classic) | rs768966657 |
ClinGen | rs768966657 |
ebi | rs768966657 |
HLI | rs768966657 |
Exac | rs768966657 |
Gnomad | rs768966657 |
Varsome | rs768966657 |
LitVar | rs768966657 |
Map | rs768966657 |
PheGenI | rs768966657 |
Biobank | rs768966657 |
1000 genomes | rs768966657 |
hgdp | rs768966657 |
ensembl | rs768966657 |
geneview | rs768966657 |
scholar | rs768966657 |
rs768966657 | |
pharmgkb | rs768966657 |
gwascentral | rs768966657 |
openSNP | rs768966657 |
23andMe | rs768966657 |
SNPshot | rs768966657 |
SNPdbe | rs768966657 |
MSV3d | rs768966657 |
GWAS Ctlg | rs768966657 |
Max Magnitude | 6 |
rs768966657, also known as c.335_337dupGTC, p.Arg112_Leu113insArg and Argdup112, represents a mutation in the CDKN2A gene on chromosome 9.
This appears to the mutation described by Borg et al. [PMID 8653684] as a founder mutation predisposing to melanoma from ~2000 years ago from southern Sweden.
More recently, cancer patients who have a CDKN2A Argdup112 mutation are reported to have a worse survival than non-carriers for both melanoma (hazard ratio 2.5, CI: 1.49 - 4.21) and especially non-melanoma cancers (HR 7.77, CI: 3.65 - 16.51).[PMID 27287845] news
ClinVar | |
---|---|
Risk | rs768966657(GAC;GAC) |
Alt | rs768966657(GAC;GAC) |
Reference | Rs768966657(-;-) |
Significance | Pathogenic |
Disease | Hereditary cancer-predisposing syndrome Hereditary cutaneous melanoma not provided |
Variation | info |
Gene | CDKN2A |
CLNDBN | Hereditary cancer-predisposing syndrome Hereditary cutaneous melanoma not provided |
Reversed | 0 |
HGVS | NC_000009.11:g.21971021_21971023dupGAC |
CLNSRC | |
CLNACC | RCV000162477.2, RCV000232355.1, RCV000237004.1, |