rs746834149
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common/normal |
(C;T) | 5 | Malignant melanoma predisposing mutation |
Make rs746834149(T;T) |
Reference | GRCh38.p2 38.2/147 |
Chromosome | 9 |
Position | 21974724 |
Gene | CDKN2A |
is a | snp |
is | mentioned by |
dbSNP | rs746834149 |
dbSNP (classic) | rs746834149 |
ClinGen | rs746834149 |
ebi | rs746834149 |
HLI | rs746834149 |
Exac | rs746834149 |
Gnomad | rs746834149 |
Varsome | rs746834149 |
LitVar | rs746834149 |
Map | rs746834149 |
PheGenI | rs746834149 |
Biobank | rs746834149 |
1000 genomes | rs746834149 |
hgdp | rs746834149 |
ensembl | rs746834149 |
geneview | rs746834149 |
scholar | rs746834149 |
rs746834149 | |
pharmgkb | rs746834149 |
gwascentral | rs746834149 |
openSNP | rs746834149 |
23andMe | rs746834149 |
SNPshot | rs746834149 |
SNPdbe | rs746834149 |
MSV3d | rs746834149 |
GWAS Ctlg | rs746834149 |
Max Magnitude | 5 |
rs746834149, also known as c.104G>A, p.Gly35Ala and G35A, represents a rare mutation in the CDKN2A gene on chromosome 9. Note that dbSNP shows the mutation in plus orientation as C>T, but ClinVar and a paper cited below cite evidence for the observed mutation in minus orientation as G>A.
The rs746834149(A) allele is considered pathogenic in a dominant manner for malignant melanoma, based on sources in ClinVar and elsewhere. CDKN2A mutations may also predispose to other types of cancer.[PMID 12072543],[PMID 16234564]
ClinVar | |
---|---|
Risk | rs746834149(A;A) Rs746834149(G;G) rs746834149(T;T) |
Alt | rs746834149(A;A) Rs746834149(G;G) rs746834149(T;T) |
Reference | Rs746834149(C;C) |
Significance | Unknown |
Disease | Hereditary cutaneous melanoma |
Variation | info |
Gene | CDKN2A |
CLNDBN | Hereditary cutaneous melanoma |
Reversed | 0 |
HGVS | NC_000009.11:g.21974723C>A; NC_000009.11:g.21974723C>T |
CLNSRC | UniProtKB (protein) |
CLNACC | RCV000474098.1, RCV000168280.1, |