rs621559
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in complete genomics |
| Make rs621559(A;A) |
| Make rs621559(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 43179740 |
| Gene | CFAP57, LOC105378685 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs621559 |
| dbSNP (classic) | rs621559 |
| ClinGen | rs621559 |
| ebi | rs621559 |
| HLI | rs621559 |
| Exac | rs621559 |
| Gnomad | rs621559 |
| Varsome | rs621559 |
| LitVar | rs621559 |
| Map | rs621559 |
| PheGenI | rs621559 |
| Biobank | rs621559 |
| 1000 genomes | rs621559 |
| hgdp | rs621559 |
| ensembl | rs621559 |
| geneview | rs621559 |
| scholar | rs621559 |
| rs621559 | |
| pharmgkb | rs621559 |
| gwascentral | rs621559 |
| openSNP | rs621559 |
| 23andMe | rs621559 |
| SNPshot | rs621559 |
| SNPdbe | rs621559 |
| MSV3d | rs621559 |
| GWAS Ctlg | rs621559 |
| GMAF | 0.2236 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 21460395 ]
|
| Trait | |
| Title | A genome-wide association study identifies a locus on chromosome 14q21 as a predictor of leukocyte telomere length and as a marker of susceptibility for bladder cancer |
| Risk Allele | |
| P-val | 0.000002 |
| Odds Ratio | 0.1600 [NR] unit increase |
[PMID 23180556] Leukocyte telomere length-related genetic variants in 1p34.2 and 14q21 loci contribute to the risk of esophageal squamous cell carcinoma
[PMID 24844311] 1p34.2 rs621559 and 14q21 rs398652 leukocyte telomere length-related genetic variants contribute to glioma susceptibility
