rs61749738
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common/normal |
(C;G) | 3 | possible: carrier of a Rett syndrome allele |
(G;G) | 4 | possible: Rett syndrome |
Reference | GRCh38.p2 38.2/144 |
Chromosome | X |
Position | 154031145 |
Gene | MECP2 |
is a | snp |
is | mentioned by |
dbSNP | rs61749738 |
dbSNP (classic) | rs61749738 |
ClinGen | rs61749738 |
ebi | rs61749738 |
HLI | rs61749738 |
Exac | rs61749738 |
Gnomad | rs61749738 |
Varsome | rs61749738 |
LitVar | rs61749738 |
Map | rs61749738 |
PheGenI | rs61749738 |
Biobank | rs61749738 |
1000 genomes | rs61749738 |
hgdp | rs61749738 |
ensembl | rs61749738 |
geneview | rs61749738 |
scholar | rs61749738 |
rs61749738 | |
pharmgkb | rs61749738 |
gwascentral | rs61749738 |
openSNP | rs61749738 |
23andMe | rs61749738 |
SNPshot | rs61749738 |
SNPdbe | rs61749738 |
MSV3d | rs61749738 |
GWAS Ctlg | rs61749738 |
Max Magnitude | 4 |
rs61749738, also known as c.719C>G, p.Thr240Ser and T240S, as well as c.683C>G, p.Thr228Ser and T228S, represents a rare mutation in the MECP2 gene, located on the X chromosome.
Different sources differ on whether the rare rs61749738(G) allele leads to Rett syndrome, one of the most common forms of mental retardation in females. Some sources report that this allele is benign; others conclude it is pathogenic, including the authors of [PMID 25741868].
ClinVar | |
---|---|
Risk | Rs61749738(G;G) |
Alt | Rs61749738(G;G) |
Reference | Rs61749738(C;C) |
Significance | Non-pathogenic |
Disease | not specified |
Variation | info |
Gene | MECP2 |
CLNDBN | not specified |
Reversed | 1 |
HGVS | NC_000023.10:g.153296596G>C |
CLNSRC | UniProtKB (protein) |
CLNACC | RCV000146356.2, |