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rs602875

From SNPedia

Orientationplus
Stabilizedplus
Make rs602875(A;A)
Make rs602875(A;G)
Make rs602875(G;G)
ReferenceGRCh37 37.1/131
Chromosome6
Position32502100
is asnp
is mentioned by
dbSNPrs602875
ClinGenrs602875
ebirs602875
HLIrs602875
Exacrs602875
Varsomers602875
Maprs602875
PheGenIrs602875
hapmaprs602875
1000 genomesrs602875
hgdprs602875
ensemblrs602875
gopubmedrs602875
geneviewrs602875
scholarrs602875
googlers602875
pharmgkbrs602875
gwascentralrs602875
openSNPrs602875
23andMers602875
23andMe allrs602875
SNP Nexus

SNPshotrs602875
SNPdbers602875
MSV3drs602875
GWAS Ctlgrs602875
Max Magnitude
? (A;A) (A;G) (G;G) 28
Variant in an HLA region is associated with lower susceptibility to leprosy in Asians, according to the 23andMe blog. The protective allele is G, and the odds ratio is 0.67.
GWAS snp
PMID [PMID 20018961]
Trait Leprosy
Title Genomewide Association Study of Leprosy
Risk Allele A
P-val 5E-27
Odds Ratio 1.61 [1.39-1.61]

[PMID 20017974OA-icon.png] Simultaneous analysis of all single-nucleotide polymorphisms in genome-wide association study of rheumatoid arthritis.


GET Evidence
rs602875
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.158537
summary