rs599021
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
Make rs599021(A;C) |
Make rs599021(C;C) |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 209787577 |
Gene | IRF6 |
is a | snp |
is | mentioned by |
dbSNP | rs599021 |
dbSNP (classic) | rs599021 |
ClinGen | rs599021 |
ebi | rs599021 |
HLI | rs599021 |
Exac | rs599021 |
Gnomad | rs599021 |
Varsome | rs599021 |
LitVar | rs599021 |
Map | rs599021 |
PheGenI | rs599021 |
Biobank | rs599021 |
1000 genomes | rs599021 |
hgdp | rs599021 |
ensembl | rs599021 |
geneview | rs599021 |
scholar | rs599021 |
rs599021 | |
pharmgkb | rs599021 |
gwascentral | rs599021 |
openSNP | rs599021 |
23andMe | rs599021 |
SNPshot | rs599021 |
SNPdbe | rs599021 |
MSV3d | rs599021 |
GWAS Ctlg | rs599021 |
GMAF | 0.3246 |
Max Magnitude | 0 |
[PMID 19388848] Association among IRF6 polymorphism, environmental factors, and nonsyndromic orofacial clefts in western china
[PMID 17438386] Association between IRF6 and nonsyndromic cleft lip with or without cleft palate in four populations.
[PMID 18278815] Genetic variants in IRF6 and the risk of facial clefts: single-marker and haplotype-based analyses in a population-based case-control study of facial clefts in Norway.
ClinVar | |
---|---|
Risk | rs599021(C;C) |
Alt | rs599021(C;C) |
Reference | Rs599021(A;A) |
Significance | Non-pathogenic |
Disease | Popliteal pterygium syndrome Van der Woude syndrome Cleft Lip +/- Cleft Palate |
Variation | info |
Gene | IRF6 |
CLNDBN | Popliteal pterygium syndrome Van der Woude syndrome Cleft Lip +/- Cleft Palate, Autosomal Dominant |
Reversed | 0 |
HGVS | NC_000001.10:g.209960922A>C |
CLNSRC | |
CLNACC | RCV000263360.1, RCV000318759.1, RCV000373362.1, |