rs587779329
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 6 | Lynch syndrome |
(C;T) | 6 | Lynch syndrome, pathogenic mutation |
(T;T) | 0 | common in clinvar |
Make rs587779329(C;C) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 7 |
Position | 6005890 |
Gene | PMS2 |
is a | snp |
is | mentioned by |
dbSNP | rs587779329 |
dbSNP (classic) | rs587779329 |
ClinGen | rs587779329 |
ebi | rs587779329 |
HLI | rs587779329 |
Exac | rs587779329 |
Gnomad | rs587779329 |
Varsome | rs587779329 |
LitVar | rs587779329 |
Map | rs587779329 |
PheGenI | rs587779329 |
Biobank | rs587779329 |
1000 genomes | rs587779329 |
hgdp | rs587779329 |
ensembl | rs587779329 |
geneview | rs587779329 |
scholar | rs587779329 |
rs587779329 | |
pharmgkb | rs587779329 |
gwascentral | rs587779329 |
openSNP | rs587779329 |
23andMe | rs587779329 |
SNPshot | rs587779329 |
SNPdbe | rs587779329 |
MSV3d | rs587779329 |
GWAS Ctlg | rs587779329 |
Max Magnitude | 6 |
ClinVar | |
---|---|
Risk | rs587779329(C;C) |
Alt | rs587779329(C;C) |
Reference | Rs587779329(T;T) |
Significance | Probable-Pathogenic |
Disease | Lynch syndrome |
Variation | info |
Gene | PMS2 |
CLNDBN | Lynch syndrome |
Reversed | 1 |
HGVS | NC_000007.13:g.6045521A>G |
CLNSRC | International Society for Gastrointestinal Hereditary Tumours |
CLNACC | RCV000076817.2, |