rs587779118
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 0 | common in clinvar |
(-;ACTT) | 6 | Lynch syndrome, pathogenic mutation |
Make rs587779118(ACTT;ACTT) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 2 |
Position | 47475235 |
Gene | MSH2 |
is a | snp |
is | mentioned by |
dbSNP | rs587779118 |
dbSNP (classic) | rs587779118 |
ClinGen | rs587779118 |
ebi | rs587779118 |
HLI | rs587779118 |
Exac | rs587779118 |
Gnomad | rs587779118 |
Varsome | rs587779118 |
LitVar | rs587779118 |
Map | rs587779118 |
PheGenI | rs587779118 |
Biobank | rs587779118 |
1000 genomes | rs587779118 |
hgdp | rs587779118 |
ensembl | rs587779118 |
geneview | rs587779118 |
scholar | rs587779118 |
rs587779118 | |
pharmgkb | rs587779118 |
gwascentral | rs587779118 |
openSNP | rs587779118 |
23andMe | rs587779118 |
SNPshot | rs587779118 |
SNPdbe | rs587779118 |
MSV3d | rs587779118 |
GWAS Ctlg | rs587779118 |
Max Magnitude | 6 |
aka c.1967_1970dupACTT (p.Phe657Leufs)
ClinVar | |
---|---|
Risk | rs587779118(TACT;TACT) |
Alt | rs587779118(TACT;TACT) |
Reference | Rs587779118(-;-) |
Significance | Pathogenic |
Disease | Lynch syndrome |
Variation | info |
Gene | MSH2 |
CLNDBN | Lynch syndrome |
Reversed | 0 |
HGVS | NC_000002.11:g.47702371_47702374dupACTT |
CLNSRC | International Society for Gastrointestinal Hereditary Tumours |
CLNACC | RCV000076326.2, |