rs4979462

Orientation

plus

Stabilized

plus

Geno	Mag	Summary
(C;C)	1	Normal risk of developing primary biliary cirrhosis
(C;T)	1.5	Slightly increased risk of developing primary biliary cirrhosis
(T;T)	2	Increased risk of developing primary biliary cirrhosis

Reference

GRCh38 38.1/141

Chromosome

9

Position

114804733

Gene

TNFSF15

is a	snp
is	mentioned by
dbSNP	rs4979462
dbSNP (classic)	rs4979462
ClinGen	rs4979462
ebi	rs4979462
HLI	rs4979462
Exac	rs4979462
Gnomad	rs4979462
Varsome	rs4979462
LitVar	rs4979462
Map	rs4979462
PheGenI	rs4979462
Biobank	rs4979462
1000 genomes	rs4979462
hgdp	rs4979462
ensembl	rs4979462
geneview	rs4979462
scholar	rs4979462
google	rs4979462
pharmgkb	rs4979462
gwascentral	rs4979462
openSNP	rs4979462
23andMe	rs4979462
SNPshot	rs4979462
SNPdbe	rs4979462
MSV3d	rs4979462
GWAS Ctlg	rs4979462

GMAF

0.197

Max Magnitude

2

?	(C;C) (C;T) (T;T)	28

GWAS snp
PMID	[PMID 23000144]
Trait	Primary biliary cirrhosis
Title	Genome-wide association study identifies TNFSF15 and POU2AF1 as susceptibility loci for primary biliary cirrhosis in the Japanese population.
Risk Allele	T
P-val	3E-14
Odds Ratio	1.56 [1.39-1.76]

[PMID 25028192] Associations between TNFSF15 polymorphisms and susceptibility to ulcerative colitis and Crohn's disease: A meta-analysis

[PMID 25899471] Human primary biliary cirrhosis-susceptible allele of rs4979462 enhances TNFSF15 expression by binding NF-1

[PMID 27647972] A case-control study about the association between vascular endothelial growth inhibitor gene polymorphisms and breast cancer risk in female patients in Northeast China.