Have questions? Visit https://www.reddit.com/r/SNPedia

rs4227

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(G;G) 0 common in clinvar
Make rs4227(G;T)
Make rs4227(T;T)
ReferenceGRCh38 38.1/141
Chromosome17
Position7587859
GeneMPDU1, SOX15
is asnp
is mentioned by
dbSNPrs4227
dbSNP (old)rs4227
ClinGenrs4227
ebirs4227
HLIrs4227
Exacrs4227
Gnomadrs4227
Varsomers4227
Maprs4227
PheGenIrs4227
Biobankrs4227
1000 genomesrs4227
hgdprs4227
ensemblrs4227
gopubmedrs4227
geneviewrs4227
scholarrs4227
googlers4227
pharmgkbrs4227
gwascentralrs4227
openSNPrs4227
23andMers4227
23andMe allrs4227
SNP Nexus

SNPshotrs4227
SNPdbers4227
MSV3drs4227
GWAS Ctlgrs4227
GMAF0.3099
Max Magnitude0
? (G;G) (G;T) (T;T) 28
GWAS snp
PMID [PMID 22197929]
Trait
Title A genome-wide association study in Han Chinese identifies multiple susceptibility loci for IgA nephropathy.
Risk Allele G
P-val 4E-10
Odds Ratio 1.2300 None


[PMID 12466288OA-icon.png] Haplotype and linkage disequilibrium architecture for human cancer-associated genes.


ClinVar
Risk rs4227(T;T)
Alt rs4227(T;T)
Reference Rs4227(G;G)
Significance Non-pathogenic
Disease Congenital disorder of glycosylation
Variation info
Gene SOX15 MPDU1
CLNDBN Congenital disorder of glycosylation
Reversed 0
HGVS NC_000017.10:g.7491177G>T
CLNSRC
CLNACC RCV000299242.1,