rs397507761
From SNPedia
Merged into | rs276174854 |
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;TATG) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(TATG;TATG) | 0 | common in clinvar |
(TGTA;TGTA) | 0 | common in clinvar |
Make rs397507761(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32339501 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs397507761 |
dbSNP (classic) | rs397507761 |
ClinGen | rs397507761 |
ebi | rs397507761 |
HLI | rs397507761 |
Exac | rs397507761 |
Gnomad | rs397507761 |
Varsome | rs397507761 |
LitVar | rs397507761 |
Map | rs397507761 |
PheGenI | rs397507761 |
Biobank | rs397507761 |
1000 genomes | rs397507761 |
hgdp | rs397507761 |
ensembl | rs397507761 |
geneview | rs397507761 |
scholar | rs397507761 |
rs397507761 | |
pharmgkb | rs397507761 |
gwascentral | rs397507761 |
openSNP | rs397507761 |
23andMe | rs397507761 |
SNPshot | rs397507761 |
SNPdbe | rs397507761 |
MSV3d | rs397507761 |
GWAS Ctlg | rs397507761 |
Status | Merged into rs276174854 |
Max Magnitude | 6 |
rs397507761, also known as c.5146_5149delTATG and p.Tyr1716Lysfs, represents a rare variant in the BRCA2 gene.
Multiple ClinVar submitters consider the minor allele of this SNP pathogenic for breast cancer, and it is also a founder mutation in some populations (for example, Spain).
ClinVar | |
---|---|
Risk | |
Alt | |
Reference | Rs397507761(TGTA;TGTA) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer Hereditary cancer-predisposing syndrome |
Variation | info |
Gene | BRCA2 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 2 Hereditary cancer-predisposing syndrome |
Reversed | 0 |
HGVS | NC_000013.10:g.32913638_32913641delTATG |
CLNSRC | Breast Cancer Information Core (BRCA2) |
CLNACC | RCV000044567.3, RCV000113387.3, RCV000214399.1, |