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rs3092856

From SNPedia
Orientationplus
Stabilizedplus
Geno Mag Summary
(C;C) 0 common in complete genomics
Make rs3092856(C;T)
Make rs3092856(T;T)
ReferenceGRCh38 38.1/141
Chromosome11
Position108289005
GeneATM
is asnp
is mentioned by
dbSNPrs3092856
dbSNP (old)rs3092856
ClinGenrs3092856
ebirs3092856
HLIrs3092856
Exacrs3092856
Gnomadrs3092856
Varsomers3092856
Maprs3092856
PheGenIrs3092856
Biobankrs3092856
1000 genomesrs3092856
hgdprs3092856
ensemblrs3092856
gopubmedrs3092856
geneviewrs3092856
scholarrs3092856
googlers3092856
pharmgkbrs3092856
gwascentralrs3092856
openSNPrs3092856
23andMers3092856
23andMe allrs3092856
SNPshotrs3092856
SNPdbers3092856
MSV3drs3092856
GWAS Ctlgrs3092856
GMAF0.01974
Max Magnitude0
? (C;C) (C;T) (T;T) 28

This SNP, a variant in the ATM gene, is 1 of 25 SNPs reported to represent independently minor, but cumulatively significant, increased risk for breast cancer. [PMID 17341484]

For details of all 25 SNPs in this group, along with the two methods used to calculate overall risk estimates for breast cancer, refer to the SNPedia breast cancer entry.

For this particular SNP, the risk (minor) allele is (T).


[PMID 20232390] Genetic variations of DNA repair genes and their prognostic significance in patients with acute myeloid leukemia


[PMID 18638378OA-icon.png] Analysis of variants in DNA damage signalling genes in bladder cancer.



ClinVar
Risk rs3092856(T;T)
Alt rs3092856(T;T)
Reference Rs3092856(C;C)
Significance Other
Disease not specified Hereditary cancer-predisposing syndrome Ataxia-telangiectasia syndrome
Variation info
Gene ATM
CLNDBN not specified Hereditary cancer-predisposing syndrome Ataxia-telangiectasia syndrome
Reversed 0
HGVS NC_000011.9:g.108159732C>T
CLNSRC UniProtKB (protein)
CLNACC RCV000120137.3, RCV000128897.2, RCV000284881.1,