Have questions? Visit https://www.reddit.com/r/SNPedia

rs267607059

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(C;C) 0 common in clinvar
(C;T) 3 Carrier of a Glut1 deficiency mutation
(T;T) 9 Glut1 Deficiency (predicted)
ReferenceGRCh38 38.1/141
Chromosome1
Position42927118
GeneSLC2A1
is asnp
is mentioned by
dbSNPrs267607059
dbSNP (classic)rs267607059
ClinGenrs267607059
ebirs267607059
HLIrs267607059
Exacrs267607059
Gnomadrs267607059
Varsomers267607059
LitVarrs267607059
Maprs267607059
PheGenIrs267607059
Biobankrs267607059
1000 genomesrs267607059
hgdprs267607059
ensemblrs267607059
geneviewrs267607059
scholarrs267607059
googlers267607059
pharmgkbrs267607059
gwascentralrs267607059
openSNPrs267607059
23andMers267607059
SNPshotrs267607059
SNPdbers267607059
MSV3drs267607059
GWAS Ctlgrs267607059
Max Magnitude9

rs267607059, also known as c.1402C>T, p.Arg468Trp and R468W, represents a rare variant in the SLC2A1 gene on chromosome 1.

Although SLC2A1 mutations are more commonly associated with dominantly inherited GLUT1 deficiency, rs267607059 has been found to be recessively inherited.

This is based on several studies, including one based on an index patient and her asymptomatic younger sister (who was apparently too young to show symptoms). The mutation was absent in 120 control alleles of healthy individuals as well as in 400 alleles of other GLUT1DS patients. Arg468 represents a highly conserved, functionally important amino acid residue in the GLUT1 carboxy-terminus essential for substrate recognition and transport. Both unaffected parents were heterozygous for the mutation. Patients heterozygous for other SLC2A1 mutations experience milder symptoms.[PMID 20221955], [PMID 20687207OA-icon.png]


ClinVar
Risk Rs267607059(T;T)
Alt Rs267607059(T;T)
Reference Rs267607059(C;C)
Significance Pathogenic
Disease GLUT1 deficiency syndrome 1
Variation info
Gene SLC2A1
CLNDBN GLUT1 deficiency syndrome 1, autosomal recessive
Reversed 1
HGVS NC_000001.10:g.43392789G>A
CLNSRC OMIM Allelic Variant UniProtKB (protein)
CLNACC RCV000017500.24,