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rs2255221

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(G;G) 0 common in complete genomics
Make rs2255221(G;T)
Make rs2255221(T;T)
ReferenceGRCh38 38.1/141
Chromosome6
Position31463914
GeneHCP5
is asnp
is mentioned by
dbSNPrs2255221
dbSNP (old)rs2255221
ClinGenrs2255221
ebirs2255221
HLIrs2255221
Exacrs2255221
Gnomadrs2255221
Varsomers2255221
Maprs2255221
PheGenIrs2255221
Biobankrs2255221
1000 genomesrs2255221
hgdprs2255221
ensemblrs2255221
gopubmedrs2255221
geneviewrs2255221
scholarrs2255221
googlers2255221
pharmgkbrs2255221
gwascentralrs2255221
openSNPrs2255221
23andMers2255221
23andMe allrs2255221
SNP Nexus

SNPshotrs2255221
SNPdbers2255221
MSV3drs2255221
GWAS Ctlgrs2255221
GMAF0.08907
Max Magnitude0
? (G;G) (G;T) (T;T) 28
GWAS snp
PMID [PMID 21051598OA-icon.png]
Trait
Title The Major Genetic Determinants of HIV-1 Control Affect HLA Class I Peptide Presentation
Risk Allele T
P-val 4E-14
Odds Ratio 2.7000 [NR]


[PMID 19276793OA-icon.png] Host genetics and HIV-1 viral load set-point in African-Americans.


GET Evidence
HCP5-W82C
aa_change Trp82Cys
aa_change_short W82C
impact not reviewed
qualified_impact Insufficiently evaluated not reviewed
overall_frequency 0.117188
summary