rs2107538
| Orientation | plus |
| Stabilized | plus |
| Make rs2107538(C;C) |
| Make rs2107538(C;T) |
| Make rs2107538(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 17 |
| Position | 35880776 |
| Gene | CCL5, LOC105371744 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2107538 |
| dbSNP (classic) | rs2107538 |
| ClinGen | rs2107538 |
| ebi | rs2107538 |
| HLI | rs2107538 |
| Exac | rs2107538 |
| Gnomad | rs2107538 |
| Varsome | rs2107538 |
| LitVar | rs2107538 |
| Map | rs2107538 |
| PheGenI | rs2107538 |
| Biobank | rs2107538 |
| 1000 genomes | rs2107538 |
| hgdp | rs2107538 |
| ensembl | rs2107538 |
| geneview | rs2107538 |
| scholar | rs2107538 |
| rs2107538 | |
| pharmgkb | rs2107538 |
| gwascentral | rs2107538 |
| openSNP | rs2107538 |
| 23andMe | rs2107538 |
| SNPshot | rs2107538 |
| SNPdbe | rs2107538 |
| MSV3d | rs2107538 |
| GWAS Ctlg | rs2107538 |
| GMAF | 0.2828 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
discussed in the 23andMe blog
- TT Increased CCL5 levels; increased rate of HIV disease progression
[PMID 21510799] Polymorphisms in the RANTES Gene Increase Susceptibility to Active Tuberculosis in Tunisia
[PMID 21547257
] CCL5/RANTES Gene Polymorphisms in Slavonic Patients with Myocardial Infarction
[PMID 15726497] Gene-environment interaction effects on the development of immune responses in the 1st year of life.
[PMID 16078996] Association study of functional genetic variants of innate immunity related genes in celiac disease.
[PMID 16719905] Association study of genetic variants of pro-inflammatory chemokine and cytokine genes in systemic lupus erythematosus.
[PMID 16773571] Genetic variation in the CCL18-CCL3-CCL4 chemokine gene cluster influences HIV Type 1 transmission and AIDS disease progression.
[PMID 16855620] Genetic variants of RANTES are associated with serum RANTES level and protection for type 1 diabetes.
[PMID 17540042] The association of RANTES polymorphism with severe acute respiratory syndrome in Hong Kong and Beijing Chinese.
[PMID 17705862] Optimization of candidate-gene SNP-genotyping by flexible oligonucleotide microarrays; analyzing variations in immune regulator genes of hay-fever samples.
[PMID 17848170] The chemokine network. II. On how polymorphisms and alternative splicing increase the number of molecular species and configure intricate patterns of disease susceptibility.
[PMID 17984846] Single nucleotide polymorphism of CC chemokine ligand 5 promoter gene in recipients may predict the risk of chronic graft-versus-host disease and its severity after allogeneic transplantation.
[PMID 18217191] Association of CC chemokine ligand 5 genotype with urinary albumin excretion in the non-diabetic Japanese general population: the Takahata study.
[PMID 18805939] Functional genetic polymorphisms and female reproductive disorders: part II--endometriosis.
[PMID 19347053] Analysis of inflammation- and atherosclerosis-related gene polymorphisms in branch retinal vein occlusion.
[PMID 20041166] Common genetic variation and the control of HIV-1 in humans.
[PMID 20805685] Significant associations between CCL5 gene polymorphisms and post-transplantational diabetes mellitus in Korean renal allograft recipients.
[PMID 21376715] The RANTES gene promoter polymorphisms are associated with the risk of atherothrombotic cerebral infarction in Northern Han Chinese.
[PMID 23168091] Chemokine Ligand 5 (CCL5) and Chemokine Receptor (CCR5) Genetic Variants and Prostate Cancer Risk among men of African Descent: A Case-Control Study
[PMID 23906684] Genetic associations with coronary heart disease: Meta-analyses of 12 candidate genetic variants
[PMID 23957698] Association Study of Chemokine (C-C motif) Ligand 5 Gene Polymorphism and Papillary Thyroid Cancer
[PMID 23133602] Pharmacogenetics of efficacy and safety of HCV treatment in HCV-HIV coinfected patients: significant associations with IL28B and SOCS3 gene variants.
[PMID 23198952] Association of CXCL1 promoter polymorphism with ischaemic stroke in Korean population.
[PMID 23207898] RANTES polymorphisms and the risk of graft-versus-host disease in human leukocyte antigen-matched sibling allogeneic hematopoietic stem cell transplantation.
[PMID 23663310] Investigating highly replicated asthma genes as candidate genes for allergic rhinitis.
[PMID 27472286] CCL2, CCL5, IL4 and IL15 Gene Polymorphisms in Women with Gestational Diabetes Mellitus.
[PMID 29696014] Genetic Polymorphism at CCL5 Is Associated With Protection in Chagas' Heart Disease: Antagonistic Participation of CCR1+ and CCR5+ Cells in Chronic Chagasic Cardiomyopathy.
