rs1801552
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(T;T) | 0 | common in clinvar |
Make rs1801552(C;C) |
Make rs1801552(C;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 16 |
Position | 68823538 |
Gene | CDH1 |
is a | snp |
is | mentioned by |
dbSNP | rs1801552 |
dbSNP (classic) | rs1801552 |
ClinGen | rs1801552 |
ebi | rs1801552 |
HLI | rs1801552 |
Exac | rs1801552 |
Gnomad | rs1801552 |
Varsome | rs1801552 |
LitVar | rs1801552 |
Map | rs1801552 |
PheGenI | rs1801552 |
Biobank | rs1801552 |
1000 genomes | rs1801552 |
hgdp | rs1801552 |
ensembl | rs1801552 |
geneview | rs1801552 |
scholar | rs1801552 |
rs1801552 | |
pharmgkb | rs1801552 |
gwascentral | rs1801552 |
openSNP | rs1801552 |
23andMe | rs1801552 |
SNPshot | rs1801552 |
SNPdbe | rs1801552 |
MSV3d | rs1801552 |
GWAS Ctlg | rs1801552 |
GMAF | 0.3067 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
[PMID 22535324] CDH1 gene polymorphisms, plasma CDH1 levels and risk of gastric cancer in a Chinese population
[PMID 24838934] Nucleotide variants of the cancer predisposing gene CDH1 and the risk of non-syndromic cleft lip with or without cleft palate
[PMID 25150394] Genetic variation of the E-cadherin gene is associated with primary infertility in patients with ovarian endometriosis
ClinVar | |
---|---|
Risk | rs1801552(C;C) |
Alt | rs1801552(C;C) |
Reference | Rs1801552(T;T) |
Significance | Non-pathogenic |
Disease | Hereditary cancer-predisposing syndrome not specified Hereditary diffuse gastric cancer |
Variation | info |
Gene | CDH1 |
CLNDBN | Hereditary cancer-predisposing syndrome not specified Hereditary diffuse gastric cancer |
Reversed | 0 |
HGVS | NC_000016.9:g.68857441T>C |
CLNSRC | Ambry Genetics ClinVar |
CLNACC | RCV000132164.2, RCV000246442.1, RCV000293455.1, |