rs1801197
From SNPedia
Orientation | minus |
Stabilized | minus |
Make rs1801197(C;C) |
Make rs1801197(C;T) |
Make rs1801197(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 7 |
Position | 93426441 |
Gene | CALCR |
is a | snp |
is | mentioned by |
dbSNP | rs1801197 |
dbSNP (classic) | rs1801197 |
ClinGen | rs1801197 |
ebi | rs1801197 |
HLI | rs1801197 |
Exac | rs1801197 |
Gnomad | rs1801197 |
Varsome | rs1801197 |
LitVar | rs1801197 |
Map | rs1801197 |
PheGenI | rs1801197 |
Biobank | rs1801197 |
1000 genomes | rs1801197 |
hgdp | rs1801197 |
ensembl | rs1801197 |
geneview | rs1801197 |
scholar | rs1801197 |
rs1801197 | |
pharmgkb | rs1801197 |
gwascentral | rs1801197 |
openSNP | rs1801197 |
23andMe | rs1801197 |
SNPshot | rs1801197 |
SNPdbe | rs1801197 |
MSV3d | rs1801197 |
GWAS Ctlg | rs1801197 |
GMAF | 0.472 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
ClinVar | |
---|---|
Risk | rs1801197(C;C) |
Alt | rs1801197(C;C) |
Reference | rs1801197(T;T) |
Significance | Other |
Disease | Bone mineral density quantitative trait locus 15 |
Variation | info |
Gene | CALCR |
CLNDBN | Bone mineral density quantitative trait locus 15 |
Reversed | 1 |
HGVS | NC_000007.13:g.93055753A>G |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000019203.2, |
[PMID 17002564] Robust and comprehensive analysis of 20 osteoporosis candidate genes by very high-density single-nucleotide polymorphism screen among 405 white nuclear families identified significant association and gene-gene interaction.
[PMID 18551993] SNP combinations in chromosome-wide genes are associated with bone mineral density in Taiwanese women.
[PMID 18787887] Genetic variation in candidate osteoporosis genes, bone mineral density, and fracture risk: the study of osteoporotic fractures.
[PMID 28435134] Association of calcitonin receptor gene (CALCR) polymorphism with kidney stone disease in the population of West Bengal, India.
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 7
- Has genotype
- Has population
- Uses omim
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d