rs1801197

Orientation

minus

Stabilized

minus

Make rs1801197(C;C)

Make rs1801197(C;T)

Make rs1801197(T;T)

Reference

GRCh38 38.1/141

Chromosome

7

Position

93426441

Gene

CALCR

is a	snp
is	mentioned by
dbSNP	rs1801197
dbSNP (classic)	rs1801197
ClinGen	rs1801197
ebi	rs1801197
HLI	rs1801197
Exac	rs1801197
Gnomad	rs1801197
Varsome	rs1801197
LitVar	rs1801197
Map	rs1801197
PheGenI	rs1801197
Biobank	rs1801197
1000 genomes	rs1801197
hgdp	rs1801197
ensembl	rs1801197
geneview	rs1801197
scholar	rs1801197
google	rs1801197
pharmgkb	rs1801197
gwascentral	rs1801197
openSNP	rs1801197
23andMe	rs1801197
SNPshot	rs1801197
SNPdbe	rs1801197
MSV3d	rs1801197
GWAS Ctlg	rs1801197

GMAF

0.472

Max Magnitude

0

?

(C;C) (C;T) (T;T)

28

OMIM	114131
Desc
Variant	0001
Related	also

ClinVar
Risk	rs1801197(C;C)
Alt	rs1801197(C;C)
Reference	rs1801197(T;T)
Significance	Other
Disease	Bone mineral density quantitative trait locus 15
Variation	info
Gene	CALCR
CLNDBN	Bone mineral density quantitative trait locus 15
Reversed	1
HGVS	NC_000007.13:g.93055753A>G
CLNSRC	OMIM Allelic Variant
CLNACC	RCV000019203.2,

[PMID 17002564 ] Robust and comprehensive analysis of 20 osteoporosis candidate genes by very high-density single-nucleotide polymorphism screen among 405 white nuclear families identified significant association and gene-gene interaction.

[PMID 18551993] SNP combinations in chromosome-wide genes are associated with bone mineral density in Taiwanese women.

[PMID 18787887 ] Genetic variation in candidate osteoporosis genes, bone mineral density, and fracture risk: the study of osteoporotic fractures.

[PMID 28435134] Association of calcitonin receptor gene (CALCR) polymorphism with kidney stone disease in the population of West Bengal, India.