rs17562004
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs17562004(A;A) |
| Make rs17562004(A;G) |
| Make rs17562004(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 7 |
| Position | 7862738 |
| Gene | UMAD1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs17562004 |
| dbSNP (classic) | rs17562004 |
| ClinGen | rs17562004 |
| ebi | rs17562004 |
| HLI | rs17562004 |
| Exac | rs17562004 |
| Gnomad | rs17562004 |
| Varsome | rs17562004 |
| LitVar | rs17562004 |
| Map | rs17562004 |
| PheGenI | rs17562004 |
| Biobank | rs17562004 |
| 1000 genomes | rs17562004 |
| hgdp | rs17562004 |
| ensembl | rs17562004 |
| geneview | rs17562004 |
| scholar | rs17562004 |
| rs17562004 | |
| pharmgkb | rs17562004 |
| gwascentral | rs17562004 |
| openSNP | rs17562004 |
| 23andMe | rs17562004 |
| SNPshot | rs17562004 |
| SNPdbe | rs17562004 |
| MSV3d | rs17562004 |
| GWAS Ctlg | rs17562004 |
| GMAF | 0.2016 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| Rs17562004 | |
|---|---|
| PubMed | [PMID 17876339] |
| Affy Probeset | SNP_A-1820918 |
| Affy Orientation | same |
| On GW 5.0 | 1 |
| Alleles A/B | A/G |
| Ancestral | G |
| Population | |
| Allele | A |
| Case Freq. | |
| Control Freq. | |
| Odds Ratio Het | 1.20 |
| Odds Ratio Hom | 1.50 |
| Odds Ratio All | |
| Disease | Prostate cancer (PC) |
rs17562004 is in linkage disequilibrium with a polymorphism that increases susceptibility to Prostate cancer 1.20 times for heterozygotes (AG) and 1.50 times for homozygotes (AA) [PMID 17876339]
