rs1452787
From SNPedia
Orientation | plus |
Stabilized | plus |
Make rs1452787(A;A) |
Make rs1452787(A;G) |
Make rs1452787(G;G) |
Reference | GRCh38 38.1/141 |
Chromosome | 18 |
Position | 55539976 |
Gene | TCF4 |
is a | snp |
is | mentioned by |
dbSNP | rs1452787 |
dbSNP (classic) | rs1452787 |
ClinGen | rs1452787 |
ebi | rs1452787 |
HLI | rs1452787 |
Exac | rs1452787 |
Gnomad | rs1452787 |
Varsome | rs1452787 |
LitVar | rs1452787 |
Map | rs1452787 |
PheGenI | rs1452787 |
Biobank | rs1452787 |
1000 genomes | rs1452787 |
hgdp | rs1452787 |
ensembl | rs1452787 |
geneview | rs1452787 |
scholar | rs1452787 |
rs1452787 | |
pharmgkb | rs1452787 |
gwascentral | rs1452787 |
openSNP | rs1452787 |
23andMe | rs1452787 |
SNPshot | rs1452787 |
SNPdbe | rs1452787 |
MSV3d | rs1452787 |
GWAS Ctlg | rs1452787 |
GMAF | 0.2796 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 22821403] |
Trait | Sclerosing cholangitis and ulcerative colitis (combined) |
Title | Genome-wide association analysis in Primary sclerosing cholangitis and ulcerative colitis identifies risk loci at GPR35 and TCF4. |
Risk Allele | A |
P-val | 3E-8 |
Odds Ratio | 1.33 [1.20-1.47] |
[PMID 30973406] Association of rs613872 and Trinucleotide Repeat Expansion in the TCF4 Gene of German Patients With Fuchs Endothelial Corneal Dystrophy.
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 18
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip 23andMe v5
- On chip Affy GenomeWide 6
- On chip Ancestry v2c
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip Ancestry v2d