rs11558538
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common on affy axiom data |
Make rs11558538(C;T) |
Make rs11558538(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 2 |
Position | 138002079 |
Gene | HNMT, LOC107985948 |
is a | snp |
is | mentioned by |
dbSNP | rs11558538 |
dbSNP (classic) | rs11558538 |
ClinGen | rs11558538 |
ebi | rs11558538 |
HLI | rs11558538 |
Exac | rs11558538 |
Gnomad | rs11558538 |
Varsome | rs11558538 |
LitVar | rs11558538 |
Map | rs11558538 |
PheGenI | rs11558538 |
Biobank | rs11558538 |
1000 genomes | rs11558538 |
hgdp | rs11558538 |
ensembl | rs11558538 |
geneview | rs11558538 |
scholar | rs11558538 |
rs11558538 | |
pharmgkb | rs11558538 |
gwascentral | rs11558538 |
openSNP | rs11558538 |
23andMe | rs11558538 |
SNPshot | rs11558538 |
SNPdbe | rs11558538 |
MSV3d | rs11558538 |
GWAS Ctlg | rs11558538 |
Merged from | Rs1801105 |
GMAF | 0.05601 |
Max Magnitude | 0 |
[PMID 19773194] Histamine N-methyltransferase Thr105Ile is not associated with Parkinson's disease or essential tremor
? | (C;C) (C;T) (T;T) | |
---|---|---|
|
ClinVar | |
---|---|
Risk | rs11558538(T;T) |
Alt | rs11558538(T;T) |
Reference | Rs11558538(C;C) |
Significance | Other |
Disease | Asthma |
Variation | info |
Gene | HNMT |
CLNDBN | Asthma, susceptibility to |
Reversed | 0 |
HGVS | NC_000002.11:g.138759649C>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000005467.2, |
[PMID 27399132] Thr105Ile (rs11558538) polymorphism in the histamine N-methyltransferase (HNMT) gene and risk for Parkinson disease: A PRISMA-compliant systematic review and meta-analysis.
[PMID 27837280] Thr105Ile (rs11558538) polymorphism in the histamine-1-methyl-transferase (HNMT) gene and risk for restless legs syndrome.