rs10988217
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs10988217(A;A) |
| Make rs10988217(A;G) |
| Make rs10988217(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 9 |
| Position | 129125837 |
| Gene | PPP2R4, PTPA |
| is a | snp |
| is | mentioned by |
| dbSNP | rs10988217 |
| dbSNP (classic) | rs10988217 |
| ClinGen | rs10988217 |
| ebi | rs10988217 |
| HLI | rs10988217 |
| Exac | rs10988217 |
| Gnomad | rs10988217 |
| Varsome | rs10988217 |
| LitVar | rs10988217 |
| Map | rs10988217 |
| PheGenI | rs10988217 |
| Biobank | rs10988217 |
| 1000 genomes | rs10988217 |
| hgdp | rs10988217 |
| ensembl | rs10988217 |
| geneview | rs10988217 |
| scholar | rs10988217 |
| rs10988217 | |
| pharmgkb | rs10988217 |
| gwascentral | rs10988217 |
| openSNP | rs10988217 |
| 23andMe | rs10988217 |
| SNPshot | rs10988217 |
| SNPdbe | rs10988217 |
| MSV3d | rs10988217 |
| GWAS Ctlg | rs10988217 |
| GMAF | 0.3857 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 23646285 ]
|
| Trait | Hypersomnia (HLA-DQB1*06:02 negative) |
| Title | Genome-wide association study of HLA-DQB1*06:02 negative essential hypersomnia. |
| Risk Allele | G |
| P-val | 3E-6 |
| Odds Ratio | 3.85 [2.11-7.04] |
| GWAS snp | |
|---|---|
| PMID | [PMID 24816252]
|
| Trait | Blood metabolite levels |
| Title | An atlas of genetic influences on human blood metabolites. |
| Risk Allele | A |
| P-val | 1E-18 |
| Odds Ratio | .02 [0.012-0.02] unit decrease |
[PMID 30266950] A variant at 9q34.11 is associated with HLA-DQB1*06:02 negative essential hypersomnia.
