Haplogroup A (mtDNA)
From SNPedia
A is an mtDNA Haplogroup. It is about 24,000 years old [PMID 22482806] and arose in Asia. It is found in both Asia and in Native American populations.
Tree[edit]
This phylogenetic tree of haplogroup A subclades is based on the paper by Mannis van Oven and Manfred Kayser Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation [PMID 18853457] and subsequent published research.
- RSRS
- L1'2'3'4'5'6 C146T C182T T4312C T10664C C10915T A11914G G13276A G16230A
- L2'3'4'5'6 C152T A2758G C2885T G7146A T8468C
- L2'3'4'6 C195T A247G A825t T8655C A10688G C10810T G13105A T13506C G15301A A16129G T16187C C16189T
- L3'4'6 G4104A A7521G
- L3'4 T182C! T3594C T7256C T13650C T16278C
- L3 A769G A1018G C16311T
- N G8701A C9540T G10398A C10873T A15301G!
- A A235G A663G A1736G T4248C A4824G C8794T C16290T G16319A
- N G8701A C9540T G10398A C10873T A15301G!
- L3 A769G A1018G C16311T
- L3'4 T182C! T3594C T7256C T13650C T16278C
- L3'4'6 G4104A A7521G
- L2'3'4'6 C195T A247G A825t T8655C A10688G C10810T G13105A T13506C G15301A A16129G T16187C C16189T
- L2'3'4'5'6 C152T A2758G C2885T G7146A T8468C
- L1'2'3'4'5'6 C146T C182T T4312C T10664C C10915T A11914G G13276A G16230A
Associated Genosets[edit]
| Haplogroup | Parent Haplogroup | Defining SNPs | 23andMe Genoset | Full Genomic Sequence (FTDNA, Argus Bio, and YSeq) |
|---|---|---|---|---|
| A | N | A235G A663G A1736G T4248C A4824G C8794T C16290T G16319A | ||
| A1 | A | G1442A | ||
| A1a | A1 | G9713A T16249C | ||
| A1a1 | A1a | T4928C | ||
| A2 | A | T146C! C152T!! A153G G8027A G12007A C16111T | ||
| A2a | A2 | C3330T C16192T | ||
| A2a1 | A2a | C16261T | ||
| A2a2 | A2a | C9301T | ||
| A2a3 | A2a | T16311C! | ||
| A2a4 | A2a | G5460A T16093C | ||
| A2a5 | A2a | T3552C T12166C A16233G A16331G C16362T! | ||
| A2b | A2 | T11365C | ||
| A2b1 | A2b | A16265G | ||
| A2c | A2 | T12468C G14364A | ||
| A2d | A2 | C6308T | ||
| A2d1 | A2d | 8281-8289d A11314G | ||
| A2d1a | A2d1 | T8548C G16274A | ||
| A2d2 | A2d | T5081C | ||
| A2e | A2 | C7112T G13708A T16189C! G16336A | ||
| A2ao | A2 | C9650T | ||
| A2ao1 | A2ao | T3394C C16264T | ||
| A2f | A2 | G12940A | ||
| A2f1 | A2f | T2638C G3316A G7897A T15670C (C16192T) | ||
| A2f1a | A2f1 | T1809C C12092a C14911T | ||
| A2f2 | A2f | C146T!! G676A T16357C | ||
| A2f3 | A2f3 | C151T G5585A A9156G G11914A! C14275T G15323A | ||
| A2g | A2 | A7724t G16391A | ||
| A2g1 | A2g1 | A4970G C13855T | ||
| A2h | A2 | G16526A | ||
| A2h1 | A2h1 | G1598A G1888A T12811C A16335G | ||
| A2i | A2 | G94A 960.XC 3307.1A T3308C C5165T T6620C A14280G T14470C C15386T T16325C | ||
| A3 | A | T2857C A8962G C9711T | ||
| A3a | A3 | A13140G | ||
| A7 | A | T146C! A8413G G10172A C15379T A16051G G16129A! T16189C! | ||
| A9 | A | C6950T A7228G G8340A A10700G A15874G | ||
| A11 | A | C9650T A16293c | ||
| A11a | A11 | T1005C 5899.XC G6755A T8843C | ||
| A11b | H11 | T3290C C16527T | ||
| A5 | A | A8563G C11536T | ||
| A5a | A5 | 2156.1A G4655A C11647T C16187T! | ||
| A5a1 | A5a | C14944T | ||
| A5a1a | A5a1 | G10801A | ||
| A5a1a1 | A5a1a | G5773A T12880C | ||
| A5a1a1a | A5a1a1 | A13221G | ||
| A5a1a1b | A5a1a1 | T4736C | ||
| A5a1a2 | A5a1a | C8628T | ||
| A5a1b | A5a1 | A16160G | ||
| A5a2 | A5a | T13461C | ||
| A5a3 | A5a3 | A12909G | ||
| A5a3a | A5a3 | T15341C | ||
| A5a4 | A5a | G10325A | ||
| A5a5 | A5a | C7694T | ||
| A5b | A5 | T961C 965.XC | ||
| A5b1 | A5b | G1709A T16126C A16235G | ||
| A5b1a | A5b1 | C10637T | ||
| A5b1b | A5b1 | C16234T | ||
| A5b1c | A5b1 | T8260C | ||
| A5b1c1 | A5b1c | T152C! G5054c A15442G | ||
| A5c | A5 | T152C! G16129A! G16213A | ||
| A5c1 | A5c1 | C12816T | ||
| A8 | A | C16242T | ||
| A8a | A8 | C64T T146C! | ||
| A8a1 | A8a | T152C! G6962A G8865A A12777G | ||
| A10 | A | T5393C C7468T G9948A C10094T A16227c T16311C! |
Sources[edit]
- van Oven, Mannis; Manfred Kayser (13 Oct 2008). "Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation". Human Mutation 30 (2): E386-E394. [PMID 18853457] doi:10.1002/humu.20921.
- Behar, D.M., van Oven, M., Rosset, S., Metspalu, M., Loogväli, E.L., Silva, N.M., Kivisild, T., Torroni, A. and Villems, R. (2012). A “Copernican” reassessment of the human mitochondrial DNA tree from its root. American journal of human genetics, 90(4), 675-684. doi: 10.1016/j.ajhg.2012.03.002
See Also[edit]
Links[edit]
- Haplogroup A (mtDNA) article at Wikipedia
