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GABA/all

From SNPedia

Synthesis[edit]

 On chromosomeChromosome positionIn geneSummary
rs37918782170,815,681GAD1
rs37625552170,815,885GAD1
rs37490342170,816,965GAD1
rs121918345(C;C)2170,818,626GAD1common in clinvar
rs1219183452170,818,626GAD1
rs22411652170,821,869GAD1
rs7694042170,822,115GAD1
rs115423132170,822,115GAD1
rs38282752170,826,230GAD1
rs20587252170,833,611GAD1
rs7693902170,836,945GAD1
rs7694072170,837,198GAD1
rs37918512170,842,162GAD1
rs37918502170,851,590GAD1
rs7693912170,852,920GAD1
 On chromosomeChromosome positionIn geneSummary
rs22364181026,216,567GAD2
rs1856493171026,216,756GAD2
rs81905901026,216,765GAD2
rs18053981026,245,880GAD2
rs9929901026,278,252GAD2
rs81907481026,280,826GAD2

Degradation[edit]

 On chromosomeChromosome positionIn geneSummary
rs1731017168,746,097ABAT
rs724159992168,750,498ABAT
rs724159992(G;G)168,750,498ABATcommon in clinvar
rs724159990(C;C)168,768,220ABATcommon in clinvar
rs724159990168,768,220ABAT
rs121434578168,768,248ABAT
rs121434578(G;G)168,768,248ABATcommon in clinvar
rs786205496(G;G)168,768,866ABATcommon in clinvar
rs786205496168,768,866ABAT
rs1299926168,777,224ABAT
rs724159991168,781,360ABAT
rs724159991(T;T)168,781,360ABATcommon in clinvar
 On chromosomeChromosome positionIn geneSummary
rs2760118624,503,362ALDH5A1
rs2760118(G;G)624,503,362ALDH5A1common in clinvar
rs3765310624,503,369ALDH5A1
rs3765310(C;T)624,503,369ALDH5A1Excess GHB in blood
rs3765310(C;C)624,503,369ALDH5A1common in complete genomics
rs118203982624,504,871ALDH5A1
rs118203982(G;G)624,504,871ALDH5A1common in clinvar
rs375628463(G;G)624,515,243ALDH5A1common in clinvar
rs375628463624,515,243ALDH5A1
rs118203984(G;G)624,528,049ALDH5A1common in clinvar
rs118203984624,528,049ALDH5A1
rs118203983(C;C)624,528,057ALDH5A1common in clinvar
rs118203983624,528,057ALDH5A1
rs875989801624,528,167ALDH5A1
rs875989801(GTA;GTA)624,528,167ALDH5A1common in clinvar
rs4352670624,603,840KIAA0319
rs4352670(A;A)624,603,840KIAA0319
rs4236032624,606,499KIAA0319
rs4236032(A;A)624,606,499KIAA0319
rs761100624,632,414KIAA0319
rs761100(G;T)624,632,414KIAA0319normal risk
rs761100(G;G)624,632,414KIAA0319higher risk for dyslexia
rs761100(T;T)624,632,414KIAA0319normal risk
rs6935076624,644,094KIAA0319
rs2038137624,645,715KIAA0319
rs3756821624,646,593KIAA0319
rs3212236(C;T)624,648,227
rs3212236624,648,227
rs3212236(G;G)624,648,227normal risk
rs3212236(A;A)624,648,227higher risk for dyslexia
rs3212236(A;G)624,648,227normal risk

Transporters[edit]

  • SLC6A1 (GABA transporter type 1, GAT1)
 On chromosomeChromosome positionIn geneSummary
rs9990174310,998,753SLC6A1
rs794726859311,017,342SLC6A1-AS1
SLC6A1
rs794726859(G;G)311,017,342SLC6A1-AS1
SLC6A1
common in clinvar
rs794726860(C;C)311,025,786SLC6A1common in clinvar
rs794726860311,025,786SLC6A1
rs876657400311,025,812SLC6A1
rs876657400(G;G)311,025,812SLC6A1common in clinvar
rs749240316311,026,281SLC6A1
rs749240316(G;G)311,026,281SLC6A1common in clinvar
rs876657401(GG;GG)311,031,222SLC6A1common in clinvar
rs876657401311,031,222SLC6A1
rs2675163311,033,328SLC6A1
rs2675163(T;T)311,033,328SLC6A1common in complete genomics
  • SLC6A13 (GABA transporter type 2, GAT2)
 On chromosomeChromosome positionIn geneSummary
rs55788112209,959SLC6A12
rs49936812211,754SLC6A12
rs201173812219,988IQSEC3
rs55504412226,756SLC6A13
rs1077402112240,132SLC6A13
rs1161333112242,301SLC6A13
rs796976112246,676SLC6A13
  • SLC6A11 (GABA transporter type 3, GAT3)
 On chromosomeChromosome positionIn geneSummary
rs1809529310,835,926SLC6A11
  • SLC6A12 (Betaine/GABA transporter, BGT1)
 On chromosomeChromosome positionIn geneSummary
rs55788112209,959SLC6A12
rs49936812211,754SLC6A12
  • SLC32A1 (Vesicular inhibitory amino acid transporter, VIAAT)
 On chromosomeChromosome positionIn geneSummary
rs11287452036,778,627SOGA1

Receptors[edit]

GABAA[edit]

alpha[edit]

 On chromosomeChromosome positionIn geneSummary
rs68838775161,851,332GABRA1
rs42635355161,857,823GABRA1
rs7960524885161,873,129GABRA1
rs796052488(G;G)5161,873,129GABRA1common in clinvar
rs5877773085161,873,196GABRA1
rs587777308(G;G)5161,873,196GABRA1common in clinvar
rs727503940(C;C)5161,882,638GABRA1common in clinvar
rs7275039405161,882,638GABRA1
rs8860393735161,882,639GABRA1
rs7960524905161,882,641GABRA1
rs796052490(C;C)5161,882,641GABRA1common in clinvar
rs5877773075161,890,945GABRA1
rs587777307(G;G)5161,890,945GABRA1common in clinvar
rs7960524915161,890,982GABRA1
rs796052491(T;T)5161,890,982GABRA1common in clinvar
rs7960524925161,890,993GABRA1
rs796052492(C;C)5161,890,993GABRA1common in clinvar
rs7947279625161,891,045GABRA1
rs11571225161,892,308GABRA1
rs7960524935161,895,668GABRA1
rs796052493(G;G)5161,895,668GABRA1common in clinvar
rs7960524945161,895,677GABRA1
rs796052494(G;G)5161,895,677GABRA1common in clinvar
rs7960524955161,895,690GABRA1
rs796052495(C;C)5161,895,690GABRA1common in clinvar
rs7960524965161,895,693GABRA1
rs796052496(C;C)5161,895,693GABRA1common in clinvar
rs796052497(C;C)5161,895,700GABRA1common in clinvar
rs7960524975161,895,700GABRA1
rs8632252925161,895,711GABRA1
rs863225292(G;G)5161,895,711GABRA1common in clinvar
rs587777309(A;A)5161,895,726GABRA1common in clinvar
rs5877773095161,895,726GABRA1
rs1214345795161,895,774GABRA1
rs121434579(C;C)5161,895,774GABRA1common in complete genomics
rs22790205161,895,883GABRA1
rs2279020(G;G)5161,895,883GABRA1common in clinvar
rs22907325161,897,892GABRA1
 On chromosomeChromosome positionIn geneSummary
rs6447493446,040,928GABRG1
rs1497571446,057,233GABRG1
rs17536211446,085,716GABRG1
rs497068446,248,660GABRA2
rs279871446,303,716GABRA2
rs279858(A;G)446,312,576GABRA2None
rs279858446,312,576GABRA2
rs279858(G;G)446,312,576GABRA2apparently more prone to alcoholism
rs279858(A;A)446,312,576GABRA2None
rs279844446,327,638GABRA2
rs279845446,327,706GABRA2
rs279826446,332,192GABRA2
rs279827446,332,685GABRA2
rs279828446,332,793GABRA2
rs279836446,337,053GABRA2
rs9291283446,369,816GABRA2
rs11503014446,388,848GABRA2
 On chromosomeChromosome positionIn geneSummary
rs2072621X151,177,387GPR50
rs1202874X151,179,756GPR50
rs561077X151,181,177GPR50
rs13440581X151,181,399GPR50
rs1149374X151,221,459
rs2131190X152,245,827GABRA3
rs750841X152,297,246GABRA3
rs4828696X152,413,524GABRA3
rs3902802X152,428,729GABRA3
 On chromosomeChromosome positionIn geneSummary
rs9291296446,920,933GABRA4
rs7660336446,927,651GABRA4
rs17599165(T;T)446,938,198GABRA4
rs17599165446,938,198GABRA4
rs1912960446,951,864GABRA4
rs1912960(G;G)446,951,864GABRA4
rs2280073446,965,556GABRA4
rs2055942446,966,033GABRA4
rs16859788(A;A)446,969,992GABRA4common in complete genomics
rs16859788446,969,992GABRA4
rs17599416446,971,421GABRA4
rs16859834446,993,349GABRA4
rs2229940446,993,349GABRA4
rs16859834(C;C)446,993,349GABRA4
 On chromosomeChromosome positionIn geneSummary
rs80301361524,777,841
rs20757161526,869,757GABRA5
rs353998851526,915,388GABRA5
 On chromosomeChromosome positionIn geneSummary
rs19926475161,684,168GABRA6
rs32191515161,701,908GABRA6

beta[edit]

 On chromosomeChromosome positionIn geneSummary
rs11726563446,821,617COX7B2
rs9291296446,920,933GABRA4
rs7660336446,927,651GABRA4
rs17599165(T;T)446,938,198GABRA4
rs17599165446,938,198GABRA4
rs1912960446,951,864GABRA4
rs1912960(G;G)446,951,864GABRA4
rs2280073446,965,556GABRA4
rs2055942446,966,033GABRA4
rs16859788(A;A)446,969,992GABRA4common in complete genomics
rs16859788446,969,992GABRA4
rs17599416446,971,421GABRA4
rs16859834446,993,349GABRA4
rs2229940446,993,349GABRA4
rs16859834(C;C)446,993,349GABRA4
rs2351299(G;T)447,141,348GABRB1possible reduced risk of Autism
rs2351299447,141,348GABRB1
rs2351299(G;G)447,141,348GABRB1normal risk of autism
rs2351299(T;T)447,141,348GABRB1possible reduced risk of autism
rs7435958447,158,992GABRB1
rs2044081447,216,323GABRB1
rs728293447,355,666GABRB1
rs886039817(T;T)447,403,613GABRB1common in clinvar
rs886039817447,403,613GABRB1
rs6289447,406,692GABRB1
rs886039818447,406,706GABRB1
rs886039818(C;C)447,406,706GABRB1common in clinvar
 On chromosomeChromosome positionIn geneSummary
rs22299445161,294,312GABRB2
rs8860393755161,331,051GABRB2
rs18160715161,332,949GABRB2
rs1816071(T;C)5161,332,949GABRB2
rs65565475161,333,168GABRB2
rs8693128615161,334,830GABRB2
rs869312861(C;C)5161,334,830GABRB2common in clinvar
rs38119965161,548,936GABRB2
 On chromosomeChromosome positionIn geneSummary
rs356006651524,496,144
rs619965461526,558,984GABRB3
rs8860379411526,561,099GABRB3
rs8860379401526,567,671GABRB3
rs797045045(G;G)1526,567,721GABRB3common in clinvar
rs7970450451526,567,721GABRB3
rs121913125(G;G)1526,580,351GABRB3common in clinvar
rs1219131251526,580,351GABRB3
rs8860379391526,580,456GABRB3
rs80245641526,588,066GABRB3
rs8860379381526,621,417GABRB3
rs8789601526,683,789GABRB3
rs116314211526,706,191GABRB3
rs9817781526,712,093GABRB3
rs80434401526,727,939GABRB3
rs9704081526,743,838GABRB3
rs32123371526,765,964GABRB3
rs32123351526,766,994GABRB3
rs71651682(C;C)1526,772,759GABRB3common in complete genomics
rs716516821526,772,759GABRB3
rs1219131261526,773,681GABRB3
rs25409(C;C)1526,773,694GABRB3
rs254091526,773,694GABRB3
rs20317(C;C)1526,773,790GABRB3common in complete genomics
rs203171526,773,790GABRB3
rs81791841526,774,455GABRB3
rs4906902(A;A)1526,774,621GABRB3common in complete genomics
rs49069021526,774,621GABRB3

gamma[edit]

 On chromosomeChromosome positionIn geneSummary
rs6447493446,040,928GABRG1
rs1497571446,057,233GABRG1
rs17536211446,085,716GABRG1
rs1391166446,103,850GABRG1
rs7654165446,125,050GABRG1
 On chromosomeChromosome positionIn geneSummary
rs1832945162,071,731GABRG2
rs2093565162,091,978GABRG2
rs7960525035162,093,940GABRG2
rs796052503(C;C)5162,093,940GABRG2common in clinvar
rs289330705162,093,965GABRG2
rs1219096735162,093,965GABRG2
rs28933070(G;G)5162,093,965GABRG2
rs7960525185162,095,507GABRG2
rs796052518(T;T)5162,095,507GABRG2common in clinvar
rs7960525195162,095,516GABRG2
rs796052519(C;C)5162,095,516GABRG2common in clinvar
rs7960525055162,095,551GABRG2
rs796052505(G;G)5162,095,551GABRG2common in clinvar
rs7960525045162,097,716GABRG2
rs796052504(C;C)5162,097,716GABRG2common in clinvar
rs7960525065162,097,729GABRG2
rs796052506(A;A)5162,097,729GABRG2common in clinvar
rs267606837(C;C)5162,097,839GABRG2common in clinvar
rs2676068375162,097,839GABRG2
rs878854144(G;G)5162,097,840GABRG2common in clinvar
rs8788541445162,097,840GABRG2
rs7504596315162,101,232GABRG2
rs750459631(T;T)5162,101,232GABRG2common in clinvar
rs2110375162,101,274GABRG2
rs2109875162,108,749GABRG2
rs4402185162,114,925GABRG2
rs24221065162,134,797GABRG2
rs796052507(G;G)5162,142,163GABRG2common in clinvar
rs7960525075162,142,163GABRG2
rs7960525085162,142,238GABRG2
rs796052508(C;C)5162,142,238GABRG2common in clinvar
rs796052509(T;T)5162,142,313GABRG2common in clinvar
rs7960525095162,142,313GABRG2
rs3975147375162,149,153GABRG2
rs397514737(G;G)5162,149,153GABRG2common in clinvar
rs121909672(A;A)5162,149,168GABRG2common in clinvar
rs1219096725162,149,168GABRG2
rs7680611565162,149,170GABRG2
rs768061156(G;G)5162,149,170GABRG2common in clinvar
rs2110145162,149,412GABRG2
rs1219096745162,153,132GABRG2
rs121909674(C;C)5162,153,132GABRG2common in clinvar
rs7960525135162,153,237GABRG2
rs796052513(C;C)5162,153,237GABRG2common in clinvar
rs7960525155162,153,300GABRG2
rs796052515(C;C)5162,153,300GABRG2common in clinvar
rs4017505162,155,655GABRG2
 On chromosomeChromosome positionIn geneSummary
rs5877812231525,354,357UBE3A
rs587781223(-;-)1525,354,357UBE3Acommon in clinvar
rs587781222(D;I)1525,354,395UBE3AIf from Ancestry DNA, likely to be a miscall
rs587781222(-;-)1525,354,395UBE3Acommon in clinvar
rs5877812221525,354,395UBE3A
rs587781221(D;I)1525,354,402UBE3AIf from Ancestry DNA, likely to be a miscall
rs587781220(G;G)1525,354,402UBE3Acommon in clinvar
rs5877812201525,354,402UBE3A
rs5877812211525,354,402UBE3A
rs587781220(G;T)1525,354,402UBE3ALikely miscall if from Ancestry v2 data; otherwise, Angelmann mutation
rs587781221(G;G)1525,354,402UBE3Acommon in clinvar
rs5877812191525,354,414UBE3A
rs587781219(C;C)1525,354,414UBE3Acommon in clinvar
rs587781218(C;C)1525,354,562UBE3Acommon in clinvar
rs5877812181525,354,562UBE3A
rs7970460851525,354,569UBE3A
rs797046085(-;-)1525,354,569UBE3Acommon in clinvar
rs5877812171525,354,571UBE3A
rs587781217(T;T)1525,354,571UBE3Acommon in clinvar
rs587781216(-;-)1525,354,573UBE3Acommon in clinvar
rs5877812161525,354,573UBE3A
rs587781215(-;-)1525,354,645UBE3Acommon in clinvar
rs5877812151525,354,645UBE3A
rs587781237(T;T)1525,354,679UBE3Acommon in clinvar
rs5877812371525,354,679UBE3A
rs5877805801525,354,685UBE3A
rs587780580(A;A)1525,354,685UBE3Acommon in clinvar
rs587781213(C;C)1525,355,984UBE3Acommon in clinvar
rs5877812141525,355,984UBE3A
rs587781214(C;C)1525,355,984UBE3Acommon in clinvar
rs5877812131525,355,984UBE3A
rs5877812361525,355,989UBE3A
rs587781236(C;C)1525,355,989UBE3Acommon in clinvar
rs5877812111525,355,993UBE3A
rs587781211(CATGATGA;CATGATGA)1525,355,993UBE3Acommon in clinvar
rs587781212(-;-)1525,355,998UBE3Acommon in clinvar
rs5877812121525,355,998UBE3A
rs587781210(AG;AG)1525,356,043UBE3Acommon in clinvar
rs5877812101525,356,043UBE3A
rs8860395161525,356,696UBE3A
rs587781209(TACTGGATGTA;TACTGGATGTA)1525,356,766UBE3Acommon in clinvar
rs5877812091525,356,766UBE3A
rs8643095081525,356,778UBE3A
rs5877845201525,356,813UBE3A
rs587784520(ATTG;ATTG)1525,356,813UBE3Acommon in clinvar
rs587782919(A;A)1525,356,827UBE3Acommon in clinvar
rs5877829191525,356,827UBE3A
rs7947277381525,356,827UBE3A
rs587781235(G;G)1525,356,840UBE3Acommon in clinvar
rs5877812351525,356,840UBE3A
... further results

other[edit]

 On chromosomeChromosome positionIn geneSummary
rs237680512,024,923GABRD
rs2376805(C;C)12,024,923GABRDcommon in clinvar
rs121434580(A;A)12,027,636GABRDcommon in clinvar
rs12143458012,027,636GABRD
rs4130784612,028,260GABRD
rs41307846(G;G)12,028,260GABRDcommon in complete genomics
rs142619552(C;C)12,030,014GABRDcommon in clinvar
rs14261955212,030,014GABRD
 On chromosomeChromosome positionIn geneSummary
rs2256882X151,961,350GABRE
MIR452
rs1139916X151,969,707GABRE
 On chromosomeChromosome positionIn geneSummary
rs100361565170,788,634GABRP
rs111346545170,813,419GABRP
 On chromosomeChromosome positionIn geneSummary
rs3810651X152,652,814GABRQ

GABAA-rho[edit]

 On chromosomeChromosome positionIn geneSummary
rs1186902689,217,243GABRR1
rs12200969689,217,247GABRR1
rs404256689,948,064BACH2
rs6917758689,971,747BACH2
 On chromosomeChromosome positionIn geneSummary
rs282129689,257,779GABRR2
rs9342220690,062,093BACH2
 On chromosomeChromosome positionIn geneSummary
rs832032398,007,903GABRR3

GABAB[edit]

 On chromosomeChromosome positionIn geneSummary
rs606231121629,675,420ZFP57
rs606231121(AG;AG)629,675,420ZFP57common in clinvar
rs3117292629,684,422
rs2747442629,685,409
rs3117294629,685,552
rs3129055629,702,484
rs9258122629,703,963
rs3131866629,703,963
 On chromosomeChromosome positionIn geneSummary
rs1435252998,341,309GABBR2
rs10986018998,361,054GABBR2
rs3780422998,380,522GABBR2
rs2491397998,442,880GABBR2
rs2779551998,490,944GABBR2
rs2779562998,515,399GABBR2
rs2808566998,515,611GABBR2
rs2184026998,542,066GABBR2
rs2184026(C;C)998,542,066GABBR2common in complete genomics
rs2900512998,555,639GABBR2
rs3750344998,578,034GABBR2
rs3750344(A;A)998,578,034GABBR2common in complete genomics
rs109890199100,214,259INVS
rs24910979100,240,169INVS
rs2491097(C;C)9100,240,169INVScommon on affy axiom data
rs878855332(G;G)9100,253,089INVScommon in clinvar
rs8788553329100,253,089INVS
rs1219649959100,264,835INVS
rs121964995(T;T)9100,264,835INVScommon in clinvar
rs121964994(C;C)9100,284,342INVScommon in clinvar
rs1219649949100,284,342INVS
rs7555494449100,292,766INVS
rs755549444(C;C)9100,292,766INVScommon in clinvar
rs200844390(C;C)9100,292,952INVScommon in clinvar
rs2008443909100,292,952INVS
rs2676071859100,292,976INVS
rs267607185(C;C)9100,292,976INVScommon in clinvar
rs376879175(C;C)9100,293,039INVScommon in clinvar
rs3768791759100,293,039INVS
rs8788553339100,300,601INVS
rs878855333(A;A)9100,300,601INVScommon in clinvar