rs704840
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs704840(G;G) |
| Make rs704840(G;T) |
| Make rs704840(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 173257056 |
| Gene | LOC100506023, TNFSF4 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs704840 |
| dbSNP (classic) | rs704840 |
| ClinGen | rs704840 |
| ebi | rs704840 |
| HLI | rs704840 |
| Exac | rs704840 |
| Gnomad | rs704840 |
| Varsome | rs704840 |
| LitVar | rs704840 |
| Map | rs704840 |
| PheGenI | rs704840 |
| Biobank | rs704840 |
| 1000 genomes | rs704840 |
| hgdp | rs704840 |
| ensembl | rs704840 |
| geneview | rs704840 |
| scholar | rs704840 |
| rs704840 | |
| pharmgkb | rs704840 |
| gwascentral | rs704840 |
| openSNP | rs704840 |
| 23andMe | rs704840 |
| SNPshot | rs704840 |
| SNPdbe | rs704840 |
| MSV3d | rs704840 |
| GWAS Ctlg | rs704840 |
| GMAF | 0.2916 |
| Max Magnitude | 0 |
| ? | (G;G) (G;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 23740937 ]
|
| Trait | Systemic lupus erythematosus and Systemic sclerosis |
| Title | A systemic sclerosis and systemic lupus erythematosus pan-meta-GWAS reveals new shared susceptibility loci. |
| Risk Allele | |
| P-val | 4E-7 |
| Odds Ratio | 1.18 [NR] |
[PMID 19357697] Association of BANK1 and TNFSF4 with systemic lupus erythematosus in Hong Kong Chinese.
[PMID 20169177] Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus.
[PMID 27519474] TNFSF4 polymorphisms are associated with systemic lupus erythematosus in the Malaysian population.
[PMID 32208776] Associations between TNFSF4 gene polymorphisms (rs2205960 G > A, rs704840 T > G and rs844648 G > A) and susceptibility to autoimmune diseases in Asians: a meta-analysis.
[PMID 33287909] The haplotypes of various TNF related genes associated with scleritis in Chinese Han.
