rs6977660
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs6977660(C;C) |
| Make rs6977660(C;T) |
| Make rs6977660(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 7 |
| Position | 19765857 |
| Gene | LOC107986774, TMEM196 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6977660 |
| dbSNP (classic) | rs6977660 |
| ClinGen | rs6977660 |
| ebi | rs6977660 |
| HLI | rs6977660 |
| Exac | rs6977660 |
| Gnomad | rs6977660 |
| Varsome | rs6977660 |
| LitVar | rs6977660 |
| Map | rs6977660 |
| PheGenI | rs6977660 |
| Biobank | rs6977660 |
| 1000 genomes | rs6977660 |
| hgdp | rs6977660 |
| ensembl | rs6977660 |
| geneview | rs6977660 |
| scholar | rs6977660 |
| rs6977660 | |
| pharmgkb | rs6977660 |
| gwascentral | rs6977660 |
| openSNP | rs6977660 |
| 23andMe | rs6977660 |
| SNPshot | rs6977660 |
| SNPdbe | rs6977660 |
| MSV3d | rs6977660 |
| GWAS Ctlg | rs6977660 |
| GMAF | 0.3499 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 17903292
] A 2007 study titled "A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study" reported that according to GEE equations, "the top SNP to be associated with mean TSH was rs6977660 (p-value 3.7*10-06)." NOTE: No risk alleles were identified, as the aim was to prioritize SNPs.
| GWAS | |
|---|---|
| SNP | rs6977660 |
| PubMedID | [PMID 17903292]
|
| Condition | Thyroid stimulating hormone |
| Gene | Intergenic |
| Risk Allele | |
| pValue | 4.00E-006 |
| OR | NA |
| 95% CI | |
