rs67828806
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 3 | Possible "Oi/eds syndrome" (mild collagen disorder): Feedback Wanted |
(G;G) | 0 | common in clinvar |
Make rs67828806(A;A) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 50198177 |
Gene | COL1A1 |
is a | snp |
is | mentioned by |
dbSNP | rs67828806 |
dbSNP (classic) | rs67828806 |
ClinGen | rs67828806 |
ebi | rs67828806 |
HLI | rs67828806 |
Exac | rs67828806 |
Gnomad | rs67828806 |
Varsome | rs67828806 |
LitVar | rs67828806 |
Map | rs67828806 |
PheGenI | rs67828806 |
Biobank | rs67828806 |
1000 genomes | rs67828806 |
hgdp | rs67828806 |
ensembl | rs67828806 |
geneview | rs67828806 |
scholar | rs67828806 |
rs67828806 | |
pharmgkb | rs67828806 |
gwascentral | rs67828806 |
openSNP | rs67828806 |
23andMe | rs67828806 |
SNPshot | rs67828806 |
SNPdbe | rs67828806 |
MSV3d | rs67828806 |
GWAS Ctlg | rs67828806 |
Max Magnitude | 3 |
rs67828806, also known as c.572G>A, p.Gly191Asp and G191D, represents a rare variant in the COL1A1 gene on chromosome 17. There is one other variant known at this position, c.572G>C, p.Gly191Ala and G191A, but it appears to be even less commonly observed.
G191D is reported (in one publication) to lead as an autosomal dominant to "Oi/eds combined syndrome", combining features of osteogenesis imperfecta and Ehlers-Danlos syndrome.[PMID 15728585] See also OMIM 120150.0064
Note: this variant may be benign or at least quite variably penetrant, based on Promethease user feedback.
ClinVar | |
---|---|
Risk | rs67828806(A;A) rs67828806(C;C) |
Alt | rs67828806(A;A) rs67828806(C;C) |
Reference | Rs67828806(G;G) |
Significance | Pathogenic |
Disease | Osteogenesis imperfecta type 1 Oi/eds combined syndrome |
Variation | info |
Gene | COL1A1 |
CLNDBN | Osteogenesis imperfecta type 1, mild Oi/eds combined syndrome |
Reversed | 1 |
HGVS | NC_000017.10:g.48275538C>G; NC_000017.10:g.48275538C>T |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000018875.30, RCV000018891.29, |