rs63749999
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 6 | Lynch syndrome, pathogenic mutation |
Make rs63749999(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 2 |
Position | 47801086 |
Gene | MSH6 |
is a | snp |
is | mentioned by |
dbSNP | rs63749999 |
dbSNP (classic) | rs63749999 |
ClinGen | rs63749999 |
ebi | rs63749999 |
HLI | rs63749999 |
Exac | rs63749999 |
Gnomad | rs63749999 |
Varsome | rs63749999 |
LitVar | rs63749999 |
Map | rs63749999 |
PheGenI | rs63749999 |
Biobank | rs63749999 |
1000 genomes | rs63749999 |
hgdp | rs63749999 |
ensembl | rs63749999 |
geneview | rs63749999 |
scholar | rs63749999 |
rs63749999 | |
pharmgkb | rs63749999 |
gwascentral | rs63749999 |
openSNP | rs63749999 |
23andMe | rs63749999 |
SNPshot | rs63749999 |
SNPdbe | rs63749999 |
MSV3d | rs63749999 |
GWAS Ctlg | rs63749999 |
Max Magnitude | 6 |
ClinVar | |
---|---|
Risk | rs63749999(T;T) |
Alt | rs63749999(T;T) |
Reference | Rs63749999(C;C) |
Significance | Pathogenic |
Disease | Lynch syndrome Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | MSH6 |
CLNDBN | Lynch syndrome Hereditary cancer-predisposing syndrome not provided |
Reversed | 0 |
HGVS | NC_000002.11:g.48028225C>T |
CLNSRC | International Society for Gastrointestinal Hereditary Tumours |
CLNACC | RCV000074803.2, RCV000223452.2, RCV000484829.1, |