rs5759167
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (T;T) | 2 | Higher prostate cancer risk |
| Make rs5759167(G;G) |
| Make rs5759167(G;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 22 |
| Position | 43104206 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs5759167 |
| dbSNP (classic) | rs5759167 |
| ClinGen | rs5759167 |
| ebi | rs5759167 |
| HLI | rs5759167 |
| Exac | rs5759167 |
| Gnomad | rs5759167 |
| Varsome | rs5759167 |
| LitVar | rs5759167 |
| Map | rs5759167 |
| PheGenI | rs5759167 |
| Biobank | rs5759167 |
| 1000 genomes | rs5759167 |
| hgdp | rs5759167 |
| ensembl | rs5759167 |
| geneview | rs5759167 |
| scholar | rs5759167 |
| rs5759167 | |
| pharmgkb | rs5759167 |
| gwascentral | rs5759167 |
| openSNP | rs5759167 |
| 23andMe | rs5759167 |
| SNPshot | rs5759167 |
| SNPdbe | rs5759167 |
| MSV3d | rs5759167 |
| GWAS Ctlg | rs5759167 |
| GMAF | 0.3705 |
| Max Magnitude | 2 |
| ? | (G;G) (G;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 19767753 ]
|
| Trait | Prostate cancer |
| Title | Identification of seven new prostate cancer susceptibility loci through a genome-wide association study |
| Risk Allele | T |
| P-val | 6E-29 |
| Odds Ratio | 1.16 [1.14-1.20] |
[PMID 21820706] Prostate Cancer Risk Alleles and Their Associations With Other Malignancies
[PMID 21390317] Characterizing associations and SNP-environment interactions for GWAS-identified prostate cancer risk markers--results from BPC3.
[PMID 23405784] [Susceptibility to prostate cancer in Han Chinese: single nucleotide polymorphism analysis of 1 667 cases]
