rs3129860
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs3129860(A;A) |
| Make rs3129860(A;G) |
| Make rs3129860(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 32433302 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3129860 |
| dbSNP (classic) | rs3129860 |
| ClinGen | rs3129860 |
| ebi | rs3129860 |
| HLI | rs3129860 |
| Exac | rs3129860 |
| Gnomad | rs3129860 |
| Varsome | rs3129860 |
| LitVar | rs3129860 |
| Map | rs3129860 |
| PheGenI | rs3129860 |
| Biobank | rs3129860 |
| 1000 genomes | rs3129860 |
| hgdp | rs3129860 |
| ensembl | rs3129860 |
| geneview | rs3129860 |
| scholar | rs3129860 |
| rs3129860 | |
| pharmgkb | rs3129860 |
| gwascentral | rs3129860 |
| openSNP | rs3129860 |
| 23andMe | rs3129860 |
| SNPshot | rs3129860 |
| SNPdbe | rs3129860 |
| MSV3d | rs3129860 |
| GWAS Ctlg | rs3129860 |
| GMAF | 0.09734 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 23321320] |
| Trait | Hepatitis C induced liver cirrhosis |
| Title | A genome-wide association study of HCV-induced liver cirrhosis in the Japanese population identifies novel susceptibility loci at the MHC region. |
| Risk Allele | A |
| P-val | 1E-9 |
| Odds Ratio | 1.36 [1.22-1.49] |
[PMID 20405052
] The effect of single nucleotide polymorphisms from genome wide association studies in multiple sclerosis on gene expression.
[PMID 21379322] Risk alleles for systemic lupus erythematosus in a large case-control collection and associations with clinical subphenotypes.
