rs2239815
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs2239815(C;C) |
| Make rs2239815(C;T) |
| Make rs2239815(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 22 |
| Position | 28796682 |
| Gene | XBP1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2239815 |
| dbSNP (classic) | rs2239815 |
| ClinGen | rs2239815 |
| ebi | rs2239815 |
| HLI | rs2239815 |
| Exac | rs2239815 |
| Gnomad | rs2239815 |
| Varsome | rs2239815 |
| LitVar | rs2239815 |
| Map | rs2239815 |
| PheGenI | rs2239815 |
| Biobank | rs2239815 |
| 1000 genomes | rs2239815 |
| hgdp | rs2239815 |
| ensembl | rs2239815 |
| geneview | rs2239815 |
| scholar | rs2239815 |
| rs2239815 | |
| pharmgkb | rs2239815 |
| gwascentral | rs2239815 |
| openSNP | rs2239815 |
| 23andMe | rs2239815 |
| SNPshot | rs2239815 |
| SNPdbe | rs2239815 |
| MSV3d | rs2239815 |
| GWAS Ctlg | rs2239815 |
| GMAF | 0.4858 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 22960999 ]
|
| Trait | Esophageal cancer (squamous cell) |
| Title | Genome-wide association analyses of esophageal squamous cell carcinoma in Chinese identify multiple susceptibility loci and gene-environment interactions. |
| Risk Allele | T |
| P-val | 4E-15 |
| Odds Ratio | 1.18 [1.13-1.23] |
[PMID 24985580] Common variants in PERK, JNK, BIP and XBP1 genes are associated with the risk of prediabetes or diabetes-related phenotypes in a Chinese population
