rs2233287

Orientation

minus

Stabilized

minus

Make rs2233287(C;C)

Make rs2233287(C;T)

Make rs2233287(T;T)

Reference

GRCh38 38.1/141

Chromosome

5

Position

151060536

Gene

TNIP1

is a	snp
is	mentioned by
dbSNP	rs2233287
dbSNP (classic)	rs2233287
ClinGen	rs2233287
ebi	rs2233287
HLI	rs2233287
Exac	rs2233287
Gnomad	rs2233287
Varsome	rs2233287
LitVar	rs2233287
Map	rs2233287
PheGenI	rs2233287
Biobank	rs2233287
1000 genomes	rs2233287
hgdp	rs2233287
ensembl	rs2233287
geneview	rs2233287
scholar	rs2233287
google	rs2233287
pharmgkb	rs2233287
gwascentral	rs2233287
openSNP	rs2233287
23andMe	rs2233287
SNPshot	rs2233287
SNPdbe	rs2233287
MSV3d	rs2233287
GWAS Ctlg	rs2233287

GMAF

0.09688

Max Magnitude

0

?	(C;C) (C;T) (T;T)	28

GWAS snp
PMID	[PMID 21750679]
Trait
Title	Genome-wide scan identifies TNIP1, PSORS1C1, and RHOB as novel risk loci for systemic sclerosis.
Risk Allele	A
P-val	5E-9
Odds Ratio	1.3100 [1.15-1.43]

[PMID 20159110] Allelic skewing of DNA methylation is widespread across the genome.

[PMID 22896740] Confirmation of TNIP1 but not RHOB and PSORS1C1 as systemic sclerosis risk factors in a large independent replication study