rs2176082
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Make rs2176082(C;C) |
| Make rs2176082(C;T) |
| Make rs2176082(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 3 |
| Position | 58345459 |
| Gene | PXK |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2176082 |
| dbSNP (classic) | rs2176082 |
| ClinGen | rs2176082 |
| ebi | rs2176082 |
| HLI | rs2176082 |
| Exac | rs2176082 |
| Gnomad | rs2176082 |
| Varsome | rs2176082 |
| LitVar | rs2176082 |
| Map | rs2176082 |
| PheGenI | rs2176082 |
| Biobank | rs2176082 |
| 1000 genomes | rs2176082 |
| hgdp | rs2176082 |
| ensembl | rs2176082 |
| geneview | rs2176082 |
| scholar | rs2176082 |
| rs2176082 | |
| pharmgkb | rs2176082 |
| gwascentral | rs2176082 |
| openSNP | rs2176082 |
| 23andMe | rs2176082 |
| SNPshot | rs2176082 |
| SNPdbe | rs2176082 |
| MSV3d | rs2176082 |
| GWAS Ctlg | rs2176082 |
| GMAF | 0.3136 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 23740937 ]
|
| Trait | Systemic lupus erythematosus and Systemic sclerosis |
| Title | A systemic sclerosis and systemic lupus erythematosus pan-meta-GWAS reveals new shared susceptibility loci. |
| Risk Allele | |
| P-val | 5E-11 |
| Odds Ratio | 1.21 [NR] |
[PMID 19838195] A large-scale replication study identifies TNIP1, PRDM1, JAZF1, UHRF1BP1 and IL10 as risk loci for systemic lupus erythematosus.
