rs2167079
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Make rs2167079(A;A) |
| Make rs2167079(A;G) |
| Make rs2167079(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 11 |
| Position | 47248704 |
| Gene | ACP2, NR1H3 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2167079 |
| dbSNP (classic) | rs2167079 |
| ClinGen | rs2167079 |
| ebi | rs2167079 |
| HLI | rs2167079 |
| Exac | rs2167079 |
| Gnomad | rs2167079 |
| Varsome | rs2167079 |
| LitVar | rs2167079 |
| Map | rs2167079 |
| PheGenI | rs2167079 |
| Biobank | rs2167079 |
| 1000 genomes | rs2167079 |
| hgdp | rs2167079 |
| ensembl | rs2167079 |
| geneview | rs2167079 |
| scholar | rs2167079 |
| rs2167079 | |
| pharmgkb | rs2167079 |
| gwascentral | rs2167079 |
| openSNP | rs2167079 |
| 23andMe | rs2167079 |
| SNPshot | rs2167079 |
| SNPdbe | rs2167079 |
| MSV3d | rs2167079 |
| GWAS Ctlg | rs2167079 |
| GMAF | 0.494 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
per the 23andMe blog, the minor allele of this SNP (T) was associated with increased HDL cholesterol
| SNP | Rarer allele | LDL | HDL | TG |
|---|---|---|---|---|
| rs6544713 | T | + | ||
| rs2650000 | A | + | ||
| rs471364 | C | - | ||
| rs1800961 | T | - | ||
| rs7679 | C | - | + | |
| rs2967605 | T | - | ||
| rs2409722 | T | - | ||
| rs10903129 | A | - | - | - |
| rs6756629 | A | - | + | - |
| rs12670798 | C | + | + | + |
| rs7395662 | A | - | + | + |
| rs174570 | T | - | - | + |
| rs2271293 | A | - | + | - |
| rs2624265 | C | + | ||
| rs2167079 | T | + | ||
| rs9891572 | T | + | ||
| rs4844614 | T | + | ||
| rs5031002 | G | + |
[PMID 17357082
] Identification of a novel risk locus for progressive supranuclear palsy by a pooled genomewide scan of 500,288 single-nucleotide polymorphisms.
[PMID 19060910] Genome-wide association analysis of metabolic traits in a birth cohort from a founder population.
