rs1799946
| Orientation | minus |
| Stabilized | minus |
| Make rs1799946(A;A) |
| Make rs1799946(A;G) |
| Make rs1799946(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 8 |
| Position | 6877909 |
| Gene | DEFB1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1799946 |
| dbSNP (classic) | rs1799946 |
| ClinGen | rs1799946 |
| ebi | rs1799946 |
| HLI | rs1799946 |
| Exac | rs1799946 |
| Gnomad | rs1799946 |
| Varsome | rs1799946 |
| LitVar | rs1799946 |
| Map | rs1799946 |
| PheGenI | rs1799946 |
| Biobank | rs1799946 |
| 1000 genomes | rs1799946 |
| hgdp | rs1799946 |
| ensembl | rs1799946 |
| geneview | rs1799946 |
| scholar | rs1799946 |
| rs1799946 | |
| pharmgkb | rs1799946 |
| gwascentral | rs1799946 |
| openSNP | rs1799946 |
| 23andMe | rs1799946 |
| SNPshot | rs1799946 |
| SNPdbe | rs1799946 |
| MSV3d | rs1799946 |
| GWAS Ctlg | rs1799946 |
| GMAF | 0.4219 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 17943629] found no association with Crohn's disease for rs1799946, but did find associations for two other DEFB1 SNPs, rs11362 and rs1800972.
[PMID 20618470] Beta defensin-1 gene (DEFB1) polymorphisms are not associated with atopic dermatitis in children and adolescents from northeast Brazil (Recife, Pernambuco)
[PMID 16700921
] Contribution of alpha- and beta-defensins to lung function decline and infection in smokers: an association study.
[PMID 18396467] Genetic variation and haplotype structures of innate immunity genes in eastern India.
[PMID 18938660] Association of beta-defensin 1 single nucleotide polymorphisms with Crohn's disease.
[PMID 18991164] Potential role of human beta-defensin 1 in Helicobacter pylori-induced gastritis.
[PMID 19390326] Role of beta-defensin-1 polymorphisms in mother-to-child transmission of HIV-1.
[PMID 19712472] Association of a genetic polymorphism (-44 C/G SNP) in the human DEFB1 gene with expression and inducibility of multiple beta-defensins in gingival keratinocytes.
[PMID 20041166] Common genetic variation and the control of HIV-1 in humans.
[PMID 22384213] Genetic variability in beta-defensins is not associated with susceptibility to Staphylococcus aureus bacteremia.
[PMID 22809755] Immune defense single nucleotide polymorphisms and recruitment strategies associated with contact lens keratitis
[PMID 23204181] Impaired beta-defensin expression in human skin links DEFB1 promoter polymorphisms with persistent Staphylococcus aureus nasal carriage.
[PMID 25020984] 8.4 Serum beta defensin concentration in the first trimester is related to genotype, and is higher in women who develop PPROM and deliver before 34 weeks
[PMID 25083086] Relevance of α-defensins (HNP1-3) and defensin β-1 in diabetes
[PMID 25683590] Chronic tonsillitis is not associated with beta defensin 1 gene polymorphisms in Turkish population
[PMID 25000179] Genetic polymorphisms and sepsis in premature neonates
[PMID 27846636] Caries and Innate Immunity: DEFB1 Gene Polymorphisms and Caries Susceptibility in Genetic Isolates from North-Eastern Italy.
[PMID 30702566] Relationship between β-defensin-1 gene polymorphism and susceptibility and prognosis of acute respiratory distress syndrome.
[PMID 32876967] Association between genetic polymorphisms in the promoter region of the Defensin Beta 1 gene and persistent apical periodontitis.
[PMID 33231892] Beta-defensin 1 gene polymorphisms in the pathologies of the oral cavity- data from meta-analysis: association only with rs1047031 not with rs1800972, rs1799946 and rs11362.
