rs12531711
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in complete genomics |
| Make rs12531711(A;G) |
| Make rs12531711(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 7 |
| Position | 128977412 |
| Gene | TNPO3 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs12531711 |
| dbSNP (classic) | rs12531711 |
| ClinGen | rs12531711 |
| ebi | rs12531711 |
| HLI | rs12531711 |
| Exac | rs12531711 |
| Gnomad | rs12531711 |
| Varsome | rs12531711 |
| LitVar | rs12531711 |
| Map | rs12531711 |
| PheGenI | rs12531711 |
| Biobank | rs12531711 |
| 1000 genomes | rs12531711 |
| hgdp | rs12531711 |
| ensembl | rs12531711 |
| geneview | rs12531711 |
| scholar | rs12531711 |
| rs12531711 | |
| pharmgkb | rs12531711 |
| gwascentral | rs12531711 |
| openSNP | rs12531711 |
| 23andMe | rs12531711 |
| SNPshot | rs12531711 |
| SNPdbe | rs12531711 |
| MSV3d | rs12531711 |
| GWAS Ctlg | rs12531711 |
| GMAF | 0.05418 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
association with lupus [PMID 17412832
] [PMID 21408207]
risk allele is (G), odds ratio 1.95 (CI: 1.68-2.25, p = 2.710e-18)[PMID 21408207]
| GWAS snp | |
|---|---|
| PMID | [PMID 21399635]
|
| Trait | |
| Title | Genome-wide association study identifies 12 new susceptibility loci for primary biliary cirrhosis |
| Risk Allele | G |
| P-val | 9E-17 |
| Odds Ratio | 1.5800 [1.41-1.76] |
[PMID 18204098] Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.
| GWAS snp | |
|---|---|
| PMID | [PMID 23053960] |
| Trait | Systemic lupus erythematosus |
| Title | Genome-wide pathway analysis of genome-wide association studies on systemic lupus erythematosus and rheumatoid arthritis. |
| Risk Allele | A |
| P-val | 6E-13 |
| Odds Ratio | 1.59 [1.403-1.808] |
