rs11556887

Orientation

minus

Stabilized

minus

Geno	Mag	Summary
(C;C)	0	common in clinvar

Make rs11556887(C;T)

Make rs11556887(T;T)

Reference

GRCh38 38.1/141

Chromosome

2

Position

230212961

Gene	SP110, SP140

is a	snp
is	mentioned by
dbSNP	rs11556887
dbSNP (classic)	rs11556887
ClinGen	rs11556887
ebi	rs11556887
HLI	rs11556887
Exac	rs11556887
Gnomad	rs11556887
Varsome	rs11556887
LitVar	rs11556887
Map	rs11556887
PheGenI	rs11556887
Biobank	rs11556887
1000 genomes	rs11556887
hgdp	rs11556887
ensembl	rs11556887
geneview	rs11556887
scholar	rs11556887
google	rs11556887
pharmgkb	rs11556887
gwascentral	rs11556887
openSNP	rs11556887
23andMe	rs11556887
SNPshot	rs11556887
SNPdbe	rs11556887
MSV3d	rs11556887
GWAS Ctlg	rs11556887

GMAF

0.06703

Max Magnitude

0

?	(C;C) (C;T) (T;T)	28

[PMID 22691368] SP110 gene polymorphisms and tuberculosis susceptibility: a systematic review and meta-analysis based on 10 624 subjects

[PMID 21397050] Association of SP110 gene polymorphisms with susceptibility to tuberculosis in a Chinese population.

[PMID 27873510] Certain Polymorphisms in SP110 Gene Confer Susceptibility to Tuberculosis: A Comprehensive Review and Updated Meta-Analysis.

ClinVar
Risk	rs11556887(T;T)
Alt	rs11556887(T;T)
Reference	Rs11556887(C;C)
Significance	Non-pathogenic
Disease	Hepatic venoocclusive disease with immunodeficiency not specified
Variation	info
Gene	SP110 LOC101928789
CLNDBN	Hepatic venoocclusive disease with immunodeficiency not specified
Reversed	1
HGVS	NC_000002.11:g.231077676G>A
CLNSRC
CLNACC	RCV000264680.1, RCV000455477.1,

[PMID 30627224] SP110 Polymorphisms Are Genetic Markers for Vulnerability to Latent and Active Tuberculosis Infection in Taiwan.