rs1143699
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 2 | In men, 2.19x risk of type 2 diabetes |
| Make rs1143699(C;T) |
| Make rs1143699(T;T) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 19 |
| Position | 5210751 |
| Gene | PTPRS |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1143699 |
| dbSNP (classic) | rs1143699 |
| ClinGen | rs1143699 |
| ebi | rs1143699 |
| HLI | rs1143699 |
| Exac | rs1143699 |
| Gnomad | rs1143699 |
| Varsome | rs1143699 |
| LitVar | rs1143699 |
| Map | rs1143699 |
| PheGenI | rs1143699 |
| Biobank | rs1143699 |
| 1000 genomes | rs1143699 |
| hgdp | rs1143699 |
| ensembl | rs1143699 |
| geneview | rs1143699 |
| scholar | rs1143699 |
| rs1143699 | |
| pharmgkb | rs1143699 |
| gwascentral | rs1143699 |
| openSNP | rs1143699 |
| 23andMe | rs1143699 |
| SNPshot | rs1143699 |
| SNPdbe | rs1143699 |
| MSV3d | rs1143699 |
| GWAS Ctlg | rs1143699 |
| GMAF | 0.0932 |
| Max Magnitude | 2 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 17893260] rs1143699, rs4807015, and rs1978237 confer an increased risk of developing type-2 diabetes "Logistic regression analysis demonstrated that for SNP rs1143699 in men, C/C homozygosity conveys an increased risk of T2D (OR = 2.19; P = 0.035)," (Abstract)
