Rs9642880

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is asnp
is mentioned by
dbSNPrs9642880
hapmaprs9642880
hgdprs9642880
ensemblrs9642880
gopubmedrs9642880
scholarrs9642880
googlers9642880
pharmgkbrs9642880
hgvbaseg2prs9642880
medrefsnprs9642880
23andMers9642880
SNP Nexus

Chromosome8
Orientationplus
Position128787249
GenotypeEffect
rs9642880(G;G)normal
rs9642880(G;T)1.2x increased bladder cancer risk
rs9642880(T;T)1.5x increased bladder cancer risk


Genotypes Magnitude Summary
Rs9642880(G;G) 00 normal
Rs9642880(G;T) 1.2x increased bladder cancer risk
Rs9642880(T;T) 1.5x increased bladder cancer risk
rs9642880 is a SNP located in chromosome region 8q24, a region that has been linked to prostate, breast, and colon cancer.

A study ultimately totaling over 4,000 bladder cancer patients of European ancestry (and 40,000 controls) concluded that individuals carrying two copies of rs9642880(T) were at 1.49x increased risk (allele-specific odds ratio = 1.22, p = 9 x 10e-12) for the disease. This SNP was not associated, however, with risk for prostate, breast, or colon cancer.10.1038/ng.229

[PMID 18794855] rs9642880(T;T) estimated risk of developing 1.49 times that of noncarriers. 1,803 urinary bladder cancer cases and 34,336 controls. No association with prostate, colorectal and breast cancers.

[PMID 19801959] In contrast to GSTM1 SNPs, the rs9642880(T) was only associated with increased risk for bladder cancer in cases not selected based on exposure to bladder carcinogens such as aromatic amines and polycyclic aromatic hydrocarbons, based on an analysis of 515 bladder cancer cases and 893 controls where the quality and quantity of occupational exposure to bladder carcinogens was documented.

? (G;G) (G;T) (T;T)
GWAS
SNP rs9642880
PubMedID [PMID 18794855]
Condition Urinary bladder cancer
Gene MYC, BC042052
Risk Allele T
pValue 9.00E-012
OR 1.22
95% CI 1.15-1.29


Related to BLADDER CANCER according to omim 109800. See also


PharmGKBPA162355811
Name
AnnotationThis variant is associated with increased risk for urinary bladder cancer. It is located on Chromosome 8q24 and 30 KB upstream of MYC.
Gene-
Featue
EvidencePubMed ID:18794855
Drugs
DiseasesUrinary Bladder Neoplasms, Urologic Neoplasms
Curation LevelCurated