From SNPedia
rs9300039, a SNP on chromosome 11 that is unusual is being over 1,000,000 base-pairs away from the nearest known gene, has been identified as a risk factor for type-2 diabetes in a study of over 2,000 Caucasian patients. The odds ratio for the risk allele rs9300039(C) was 1.48, (CI: 1.28-1.71, p=5.7x10e-8). [PMID 17463248]
This SNP is also mentioned in a related blog series.
Called into question by table 1 of 10.1371/journal.pbio.1000294
| ? | (A;A) (A;C) (C;C) |
|---|
 |
| GWAS
|
| SNP
| rs9300039
|
| PubMedID
| [PMID 17463248]
|
| Condition
| Type 2 diabetes
|
| Gene
| Intergenic
|
| Risk Allele
| C
|
| pValue
| 4.00E-007
|
| OR
| 1.25
|
| 95% CI
| 1.15-1.37
|
| PharmGKB | PA162191357 |
| Name | |
| Annotation | In a large Finnish case-control GWAS, rs9300039 was found to be associated with susceptibility to Type 2 Diabetes. |
| Gene | - |
| Featue | |
| Evidence | PubMed ID:17463248 |
| Drugs | |
| Diseases | Diabetes Mellitus, Type 2 |
| Curation Level | Curated |
