Rs7538876

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is asnp
is mentioned by
dbSNPrs7538876
hapmaprs7538876
hgdprs7538876
ensemblrs7538876
gopubmedrs7538876
scholarrs7538876
googlers7538876
pharmgkbrs7538876
hgvbaseg2prs7538876
medrefsnprs7538876
23andMers7538876
SNP Nexus

Chromosome1
Orientationplus
Position17594949
GenotypeEffect
rs7538876(A;A)1.28x increased basal cell carcinoma risk
rs7538876(A;G)1.28x increased basal cell carcinoma risk
rs7538876(G;G)normal


Genotypes Magnitude Summary
Rs7538876(A;A) 1.28x increased basal cell carcinoma risk
Rs7538876(A;G) 1.28x increased basal cell carcinoma risk
Rs7538876(G;G) 00 normal
2 SNPs located in different regions of chromosome 1 are likely to be associated with increased risk for basal cell carcinoma (BCC), the most common form of skin cancer. [PMID 18849993]
  • each A at rs7538876 yields a 1.28x increased risk of developing BCC (p = 4.4 x 10e-12)
  • each G at rs801114 also yields a 1.28x increased odds of developing BCC (p = 5.9 x 10e-12)
  • 2.68x increased risk of BCC for homozygous carriers of both SNPs

This study was based on an analysis of ~2,000 Icelandic and Eastern European skin cancer patients (as well as a large number of controls). The authors estimate that approximately 1.6% of all individuals of European ancestry are homozygous for both risk alleles, and thus that percentage of the population is at 2.68x higher risk for BCC compared to individuals who are rs7538876(G;G) and rs801114(T;T). [PMID 18849993]

See also:spittoon

? (A;A) (A;G) (G;G)
Related to BASAL CELL CARCINOMA, MULTIPLE according to omim 605462. See also


PharmGKBPA162356000
Name
AnnotationThis variant is associated with the risk of basal cell carcinoma.
GenePADI6
Featue
EvidencePubMed ID:18849993
Drugs
DiseasesCarcinoma, Basal Cell
Curation LevelCurated