Rs5963409

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is asnp
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dbSNPrs5963409
hapmaprs5963409
hgdprs5963409
ensemblrs5963409
gopubmedrs5963409
scholarrs5963409
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pharmgkbrs5963409
hgvbaseg2prs5963409
medrefsnprs5963409
23andMers5963409
SNP Nexus

GeneOTC
ChromosomeX
Orientationplus
Position38095912
GenotypeEffect
rs5963409(A;A)1.19x increased risk for Alzheimer's disease
rs5963409(A;G)1.19x increased risk for Alzheimer's disease
rs5963409(G;G)normal


Genotypes Magnitude Summary
Rs5963409(A;A) 1.19x increased risk for Alzheimer's disease
Rs5963409(A;G) 1.19x increased risk for Alzheimer's disease
Rs5963409(G;G) normal

rs5963409 is a SNP in the ornithine carbamoyltransferase OTC gene; this SNP is also known as the -389 G/A SNP.

Previous association studies were extended to a population of 2113 Alzheimer's disease cases and 1580 controls from northern France, western France, the United Kingdom and Italy. The rs5963409(A) minor allele was weakly but significantly associated with an increased risk of developing Alzheimer's disease (odds ratio 1.19, p = 0.004). This association was independent of age and ApoE status.[PMID 18983895]

[PMID 19574962] Association of Ornithine Transcarbamylase Gene Polymorphisms With Hypertension and Coronary Artery Vasomotion