Promethease 0.1.82

Rs279858

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dbSNPrs279858
hapmaprs279858
hgdprs279858
ensemblrs279858
gopubmedrs279858
scholarrs279858
googlers279858
pharmgkbrs279858
hgvbaseg2prs279858
medrefsnprs279858
23andMers279858
SNP Nexus

GeneGABRA2
Chromosome4
Orientationminus
Position46009350
GenotypeEffect
rs279858(A;A)None
rs279858(A;G)None
rs279858(G;G)apparently more prone to alcoholism


Genotypes Magnitude Summary
Rs279858(A;A) None
Rs279858(A;G) None
Rs279858(G;G) 22 apparently more prone to alcoholism

This SNP in the GABRA2 gene has been linked to Alcoholism. The effect of this SNP, a synonymous change at amino acid residue 132, is unknown, but it does not change the GABRA2 protein sequence.

Carriers of at least one rs279858(G) allele respond slower to the effects of alcohol and are thereby apparently more prone to alcoholism than carriers of two rs279858(A) alleles. Finasteride, an FDA approved drug for the treatment of benign prostatic hypertrophy and a modulator of GABRA2, was shown to have more of a blocking effect on rs279858(A) homozygotes. [PMID 15702134]

Note that nearby SNPs have been grouped into a haplotype that shows statistically stronger association with alcohol dependence, namely the haplotype consisting of the rs279871(A) + rs279845(T) + rs279836(A) alleles [PMID 15024690].

[PMID 18482426] 1050 nicotine-dependent cases and 879 non-dependent smoking controls rs279858 and rs16859834 aka rs2229940

? (A;A) (A;G) (G;G)
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